|   |
24 | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | |
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. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  | . |  |  |  |
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| . | . | . |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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| . |
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. |
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Query Sequence |   |
A | G | G | I | A | L | G | A | T | R | . |
I | I | Y | P | A | . |
. |
. |
D | A | K | Q | T | A | V | W | I | R | N | S | H | T | N | E | R | F | L | V | N | S | W | I | E | N | S | S | G | V | K | E | K | S | F | I | I | T | P | P | L | F | V | S | E | P | K | S | E | N | T | L | R | I | I | Y | T | G | P | P | L |
Query Conservation |   |
  |
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|   |
|   |   |
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| . |
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|   |   |   | . | . | . |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |
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|   |
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|   |   |   |   |   |   |
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Alig confidence |   |
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| . |
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| . | . | . |
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| . | . |
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| . | . | . | . |
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Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   | . | . |
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|   |   | . | . | . | . |   |   |
|   |
|   |
|   |   |
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|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
P | G | D | I | Q | T | Q | P | G | T | K | I | V | F | N | A | P | Y | D | D | K | H | T | Y | H | I | K | V | I | N | S | S | A | R | R | . |
. |
I | G | Y | G | I | K | T | T | N | M | . |
. |
. |
. |
K | R | L | G | V | D | P | P | C | G | V | L | D | P | K | E | A | V | L | L | A | V | S | C | D | A | F | A | F |
Template Known Secondary structure |   |
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|  |  |  |  | S | S | S |
|  |  |  |  | S |
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| S | S |
|  |  |  |  |  |  |  |  |  |
| S | S | S |
| . | . |  |  |  |  |  |  |  | S |
| T | . | . | . | . | T | T |  |  |  |  | S | S |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |
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| G |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  | . | . |  |  |  |  |  |  |
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| . | . | . | . |
|  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
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. | . | . | . | . | . | . | . | . | 50 | |
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. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
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. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
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| . |
. |
. |
. |
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Query Sequence |   |
A | A | D | R | E | S | L | F | W | M | N | V | K | T | I | P | S | V | D | K | N | A | L | N | G | R | . |
. |
. |
. |
N | V | L | Q | L | A | I | L | S | R | M | K | L | F | L | R | P |
Query Conservation |   |
|   |
|
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|
|   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
|   |
|   |   |   |   |   |
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|   |
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|
Alig confidence |   |
|
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| . | . | . | . |
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|
Template Sequence |   |
G | Q | E | D | T | N | N | D | R | I | T | V | E | W | T | N | T | P | D | G | A | A | K | Q | F | R | R | E | W | F | Q | G | D | G | M | V | R | R | K | N | L | P | I | E | Y | N | P |
Template Known Secondary structure |   |
G | G | S |
|
| T | T |
|  |  |  |  |  |  |  |  |
|
| S | S |
|
| S | S |
|
| G | G | G | G | T | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
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|
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|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |