Job Description P77249 Confidence 92.89% Date Thu Jan 5 12:26:49 GMT 2012 Rank 25 Aligned Residues 85 % Identity 7% Template c3o0lB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pfam duf1425 family member (shew_1734) from2 shewanella sp. pv-4 at 1.81 a resolution Resolution 1.81 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	G	G	I	A	L	G	A	T	R	I	I	Y	P	A	D	A	K	Q	T	A	V	W	I	R	N	S	H	T	N	E	R	F	L	V	N	S	W	I	E	N	S	S	G	V	K	E	K	S	F	I	I	T	P	.	P	L	F	V	S	E	P	K	S	E	N	T	L	R	I	I	Y	T	G	P	P	L	A	A	D
Query Conservation																																																								.
Alig confidence																																																								.																		.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		H	S	D	V	D	V	S	A	V	T	T	Q	A	E	A	G	F	L	R	A	R	G	T	I	I	S	K	S	P	K	D	Q	R	L	Q	Y	K	F	T	W	Y	D	I	N	G	A	T	V	E	D	E	G	V	S	W	K	S	L	K	L	H	G	K	Q	Q	X	Q	V	T	A	L	S	.	.	.	.	.	P	N	A
Template Known Secondary structure																T	T												S	S	S													T	T	S						T	T										T	T										.	.	.	.	.	S	S	T
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.
		103	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	S	L	F	W	M	N	V	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	V	R	C	E	L	Y	V	R	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions