Job Description P77249 Confidence 54.13% Date Thu Jan 5 12:26:49 GMT 2012 Rank 41 Aligned Residues 105 % Identity 8% Template c3h6aB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-4; PDBTitle: structure of the calx-beta domain of integrin beta42 crystallized in the presence of calcium Resolution 1.61 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																							.																																										.
Query SS confidence																							.																																										.
Query Sequence		I	A	L	G	A	T	R	I	I	Y	P	A	D	A	K	Q	T	A	V	W	I	.	R	N	S	H	T	N	E	R	F	L	V	N	S	W	I	E	N	S	S	G	V	K	E	K	S	F	I	I	T	P	P	L	F	V	S	E	P	K	S	E	N	.	T	L	R	I	I	Y	T	G	P	P	L	A	A	D	R	E
Query Conservation																							.																																										.
Alig confidence																							.																																										.
Template Conservation
Template Sequence		V	S	F	E	Q	P	E	F	S	V	S	R	G	D	Q	V	A	R	I	P	V	I	R	R	V	L	D	G	G	K	S	Q	V	S	Y	R	T	Q	D	G	T	A	Q	G	N	R	D	Y	I	P	V	E	G	E	L	L	F	Q	P	G	E	A	W	K	E	L	Q	V	K	L	L	E	L	L	L	R	G	R	Q	V
Template Known Secondary structure					S		S						T	T		S										S			S	S											S	S	S		B	T	T	T	B											T	T										B						T	T
Template Predicted Secondary structure
Template SS confidence
		992	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	W	M	N	V	K	T	I	P	S	V	D	K	N	A	L	N	G	R	N	V	L	Q	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	F	H	V	Q	L	S	N	P	K	F	G	A	H	L	G	Q	P	H	S	T	T	I	I	I	R
Template Known Secondary structure													T	T					S		S
Template Predicted Secondary structure
Template SS confidence
		1077	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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