Return to main results Retrieve Phyre Job Id

Job DescriptionP77249
Confidence9.09%DateThu Jan 5 12:26:49 GMT 2012
Rank86Aligned Residues6
% Identity33%Templatec2phgB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:alpha trans-inducing protein; PDBTitle: model for vp16 binding to tfiib
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220
Predicted Secondary structure 



Query SS confidence 





Query Sequence  VNDYGS
Query Conservation 


 
 
Alig confidence 





Template Conservation 

  

Template Sequence  IDEYGG
Template Known Secondary structure  TTTT

Template Predicted Secondary structure 

Template SS confidence 





   485....490
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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