Return to main results Retrieve Phyre Job Id

Job DescriptionP77249
Confidence55.93%DateThu Jan 5 12:26:49 GMT 2012
Rank40Aligned Residues57
% Identity18%Templatec2lllA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:lamin-b2; PDBTitle: solution nmr structure of c-terminal globular domain of human lamin-2 b2, northeast structural genomics consortium target hr8546a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90
Predicted Secondary structure 


























Query SS confidence 
























































Query Sequence  IIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTL
Query Conservation 

         
 
 
                       






  
 
   
 
Alig confidence 
























































Template Conservation   
 
 
  

 
 
 
 
     
 

 
             

    
 

  
 
Template Sequence  SIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTV
Template Known Secondary structure 
SS
S
SSS

SS
TTS


TT

TT
Template Predicted Secondary structure 
























Template SS confidence 
























































   455....460.........470.........480.........490.........500.........510.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions