 |
Job Description | P36672 | Confidence | 99.85% | Date | Thu Jan 5 11:53:37 GMT 2012 |
Rank | 4 | Aligned Residues | 75 |
% Identity | 21% | Template | d3bp8c1 |
SCOP info | Homing endonuclease-like
| Glucose permease domain IIB
| Glucose permease domain IIB
|
Resolution | 2.85 |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | D | R | L | I | E | L | V | G | G | R | G | N | I | A | T | V | S | H | C | I | T | R | L | R | F | V | L | N | Q | P | A | N | A | R | P | K | E | I | E | Q | L | P | M | V | K | G | C | F | T | N | A | G | Q | F | Q | V | V | I | G | T | N | V | G | D | Y | Y | Q | A | L | I | A | S | T | G |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|
|   |
|   |
|
|   |   |   |
|
|   |
| . |
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
Template Sequence |   |
M | A | P | A | L | V | A | A | F | G | G | K | E | N | I | T | N | L | D | A | C | I | T | R | L | R | V | S | V | A | D | V | S | K | V | D | Q | A | G | L | K | K | L | . |
G | A | A | G | V | V | V | A | G | S | G | V | Q | A | I | F | G | T | K | S | D | N | L | K | T | E | M | D | E | Y | I | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | T |
| T | T | T |  |  |  |  |
|
|
| S | S |
|  |  |  |  |  | S |
| G | G | G |
|
|  |  |  |  |  |  |  | . | T |
| S |
|  |  |  |  | T | T |  |  |  |  |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|