Job Description P36672 Confidence 10.12% Date Thu Jan 5 11:53:37 GMT 2012 Rank 36 Aligned Residues 81 % Identity 15% Template d1wlqc_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA replication factor Cdt1 Resolution 2.80

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.
Query Sequence		G	N	I	A	T	V	S	H	C	I	T	R	L	R	F	V	L	N	Q	P	A	N	A	R	P	.	.	.	.	.	.	.	.	K	E	I	E	Q	L	P	M	V	K	G	C	F	T	N	A	G	Q	F	Q	V	V	I	G	T	N	V	G	D	Y	Y	Q	A	L	I	A	S	T	G	Q	A	Q	V	D	K	E	Q
Query Conservation																											.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.																	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	V	K	Q	G	V	Q	E	X	X	R	K	R	F	E	E	R	N	V	G	Q	I	K	T	V	Y	P	X	S	Y	R	F	R	Q	E	C	N	V	P	T	F	K	D	S	I	K	R	S	.	D	Y	Q	L	T	I	E	P	L	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	E	G	A	T	Q	L	T
Template Known Secondary structure													T	S															T	T	S										S	S			S				G	G	.	G									S	S		.	.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																																																			.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	K	A	A	R	H	N	M	K	W	H	E	Q	L	I	S	H	F	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	C	L	L	Q	R	R	Q	V	F	R	Q	N	L	V	E	R	V	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions