Return to main results Retrieve Phyre Job Id

Job DescriptionP36672
Confidence19.42%DateThu Jan 5 11:53:37 GMT 2012
Rank13Aligned Residues41
% Identity15%Templatec2pmuD_
PDB info PDB header:transcription regulationChain: D: PDB Molecule:response regulator phop; PDBTitle: crystal structure of the dna-binding domain of phop
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11...... ..20.........30.........40.........50....
Predicted Secondary structure 
.












Query SS confidence 






.




































Query Sequence  DRLIELV. GGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMV
Query Conservation    
   
.

  

    

 



  
 
        
     
Alig confidence 






.























...









Template Conservation    
   

       

   
 





    ...   
 

 
 
Template Sequence  PKILDHVWRYDFGVNVVESYVSYLRRKIDTGE. . . KRLLHTLRGV
Template Known Secondary structure  S
TT




SS...S

TTT
Template Predicted Secondary structure 









...




Template SS confidence 












































   196...200.........210.........220....... ..230.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions