 |
Job Description | P77260 | Confidence | 8.82% | Date | Thu Jan 5 12:26:57 GMT 2012 |
Rank | 58 | Aligned Residues | 33 |
% Identity | 12% | Template | c3ketA_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; |
PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator
|
Resolution | 2.40 Å |
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | R | I | V | H | L | G | F | G | A | F | H | R | A | H | Q | G | V | Y | A | D | I | L | A | T | E | H | F | S | D | W | G | Y | Y | E | V | N |
Query Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
Template Sequence |   |
T | T | N | V | M | L | V | G | C | G | N | I | G | R | A | L | L | H | . |
. |
. |
. |
. |
Y | R | F | H | D | R | N | K | M | Q | I | S | M | A | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  | T | . | . | . | . | . | S |
| G | G | G | T | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|