Return to main results Retrieve Phyre Job Id

Job DescriptionP77260
Confidence28.40%DateThu Jan 5 12:26:57 GMT 2012
Rank15Aligned Residues54
% Identity13%Templatec3fggA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein bce2196; PDBTitle: crystal structure of putative ecf-type sigma factor negative effector2 from bacillus cereus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   301........310.........320.........330......... 340.........350....
Predicted Secondary structure 










..


Query SS confidence 






































. .














Query Sequence  YLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQ. . GVDLQDYANRLIARY
Query Conservation 


 
 
  

 

  
  
   
     


 
 
  
..  

  
   

 

Alig confidence 






































..














Template Conservation 





   


 


  


 
 



  
 
 

        


 
  

   
Template Sequence  YFDKLNGHKSSKEVLTQEEFDRYXEALXTHEIVRVKTKSTGAIKVEEVPEAYKERF
Template Known Secondary structure  TT


S
T
SS


GGGS
Template Predicted Secondary structure 







Template SS confidence 























































   90.........100.........110.........120.........130.........140.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions