Job Description P77260 Confidence 39.52% Date Thu Jan 5 12:26:57 GMT 2012 Rank 8 Aligned Residues 144 % Identity 17% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	R	I	V	H	L	G	F	G	A	F	H	R	A	H	Q	G	V	Y	A	D	I	L	A	T	E	H	F	S	D	W	G	Y	Y	E	V	N	L	I	G	G	E	Q	Q	I	A	D	L	Q	Q	Q	D	N	L	Y	T	V	A	E	M	S	A	D	V	W	T	A	R	V	V	G	V	V	K	K	A	L	H
Query Conservation
Alig confidence																										.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	N	R	F	V	I	L	G	F	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	.	.	.	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	L	Q	Q	I	T
Template Known Secondary structure				S								S														.	.	.	B				G	G	G						S	S			S								T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																				.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	I	D	G	L	E	T	V	L	A	A	M	C	E	P	Q	I	A	I	V	S	L	T	I	T	.	.	.	.	.	.	.	.	.	.	.	.	E	K	G	Y	F	H	S	P	A	T	G	Q	L	M	L	D	H	P	M	V	A	A	D	V	Q	N	P	H	Q	P	K	T	A	T	G	V	I	V	E	A	L	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.												.											.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.												.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	.	.	N	Y	L	E	V	I	G	S	T	L	E	.	E	N	D	F	L	I	D	V	S	I	G	I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L
Template Known Secondary structure		T	T	.	.	T					T	G	G	G			.	T	T								S	S	S													T						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.												.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.			.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.															.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		168	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure													.										.
Query SS confidence													.										.
Query Sequence		R	R	K	A	A	G	L	P	A	F	T	.	V	M	S	C	D	N	M	P	E	.	N	G	H	V	M	R	D	V	V	T	S	Y	A	Q	A	V	D
Query Conservation													.										.
Alig confidence							.	.					.										.
Template Conservation							.	.
Template Sequence		R	L	K	D	K	.	.	T	Q	K	T	A	L	I	T	H	G	A	N	P	G	L	V	S	H	F	I	K	E	A	L	L	N	I	A	K	D	N	G
Template Known Secondary structure		T	T	T	T	T	.	.			S					S		B	T	T	T	B																T	T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		143	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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