Job Description P77260 Confidence 21.73% Date Thu Jan 5 12:26:57 GMT 2012 Rank 19 Aligned Residues 180 % Identity 13% Template c1r0lD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	P	R	I	V	H	L	G	F	.	G	A	F	H	R	A	H	Q	G	V	Y	A	D	I	L	A	T	E	H	F	S	D	W	G	Y	Y	E	V	N	L	I	G	G	E	Q	Q	I	A	D	L	Q	Q	Q	D	N	L	Y	T	V	A	E	M	S	A	D	V	W	T	A	R	V	V	G	V	V	K	K	A	L	H
Query Conservation											.
Alig confidence											.										.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		P	R	T	V	T	V	L	G	A	T	G	S	I	G	H	S	T	L	D	.	.	.	.	.	L	I	E	R	N	L	D	R	Y	Q	V	I	A	L	T	A	N	R	N	V	K	D	L	A	D	A	A	K	R	T	N	A	K	R	A	V	I	A	D	P	S	L	Y	N	D	L	K	E	A	L	A	G	S	S	V	E
Template Known Secondary structure									T	T	T	S									.	.	.	.	.					T	T	T	T									S	S													T		S					S		G	G	G								T	T	T		S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	I	D	G	L	E	T	V	L	A	A	M	C	E	P	Q	I	A	I	V	S	L	T	I	T	E	K	G	Y	F	H	S	P	A	T	G	Q	L	M	L	D	H	P	M	V	A	A	D	V	Q	N	P	H	Q	P	K	T	A	T	G	V	I	V	E	A	L	A	R	R	K	A	A	G	L	P	A	F	T	V
Query Conservation
Alig confidence						.							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	G	.	A	D	A	L	V	E	.	A	A	M	M	G	A	D	W	T	M	A	A	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	G	L	K	A	T	L	A	A	I	R	K	G	K	T	V	A	L
Template Known Secondary structure					S	.							.			T	S			S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G										T	T	S
Template Predicted Secondary structure						.							.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.		.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.																																			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		M	S	C	D	N	M	P	E	N	G	H	V	M	R	D	V	V	T	S	Y	A	Q	A	V	.	.	.	D	V	K	L	A	Q	W	I	E	D	N	V	T	F	P	S	T	M	V	D	R	I	V	P	A	V	T	E	D	T	L	A	K	I	E	Q	L	T	G	V	R	D	P	A	G	V	A	C	E	P	F	R	Q
Query Conservation																										.	.	.
Alig confidence																										.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	K	E	S	L	V	S	A	G	G	L	M	I	D	A	V	R	E	H	G	T	T	L	L	P	V	D	S	E	H	N	A	I	F	Q	C	F	P	H	H	N	R	D	Y	V	R	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	T	A	S	G	G	P	F	R	T
Template Known Secondary structure				T																		T							S												T	T		G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																					.	.	.	.	.	.	.	.	180	.	.
		257	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	I	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	L	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions