Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB14
Confidence2.97%DateThu Jan 5 11:14:22 GMT 2012
Rank27Aligned Residues30
% Identity23%Templatec8iczA_
PDB info PDB header:transferase/dnaChain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20......... 30.........40......
Predicted Secondary structure 



.



Query SS confidence 












.
















Query Sequence  LRNTSPEIAEAIF. EVAGYDEKMAEKIWEEG
Query Conservation 












.
















Alig confidence 












.
















Template Conservation 
        
  
  
 




 
  
   
Template Sequence  IRQDDTSSSINFLTRVSGIGPSAARKFVDEG
Template Known Secondary structure 
TTSTT

TTT
Template Predicted Secondary structure 









Template SS confidence 






























   88.90.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions