Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	S	R	F	I	P	I	E	L	H	H	A	S	R	L	L	N	H	G	P	T	V	L	I	T	S	F	D	E	Q	S	Q	R	R	N	I	M	A	A	A	W	S	M	P	V	E	F	E	P	P	R	V	A	I	V	V	D	K	S	T
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		W	T	R	E	L	I	E	H	N	G	K	F	G	I	V	I	P	G	V	A	A	T	N	W	T	W	A	V	G	S	V	S	G	R	D	E	D	K	F	N	C	Y	G	I	P	V	V	R	G	P	V	F	G	L	P	L	V	E	E	K
Secondary structure
SS confidence
Disorder																																					?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		C	L	A	W	M	E	C	R	L	L	P	A	T	S	A	Q	E	E	Y	D	T	L	F	G	E	V	V	S	A	A	A	D	A	R	V	F	V	E	G	R	W	Q	F	D	D	D	K	L	N	T	L	H	H	L	G	A	G	T	F	V
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.
Sequence		T	S	G	K	R	V	T	A	G
Secondary structure
SS confidence
Disorder						?			?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1eje chain A Region: 2 - 186 Aligned: 179 Modelled: 185 Confidence: 100.0% Identity: 25% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: NADH:FMN oxidoreductase-like Phyre2 PDB 3hmz chain A Region: 2 - 188 Aligned: 184 Modelled: 187 Confidence: 100.0% Identity: 40% PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase domain protein, fmn-binding; PDBTitle: crystal structure of a fmn-binding domain of flavin reductases-like2 enzyme (sbal_0626) from shewanella baltica os155 at 1.50 a resolution Phyre2 PDB 3bpk chain B Region: 3 - 188 Aligned: 181 Modelled: 186 Confidence: 100.0% Identity: 18% PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b; PDBTitle: crystal structure of nitrilotriacetate monooxygenase2 component b from bacillus cereus Phyre2 PDB 3fge chain A Region: 2 - 189 Aligned: 185 Modelled: 188 Confidence: 100.0% Identity: 18% PDB header:oxidoreductase Chain: A: PDB Molecule:putative flavin reductase with split barrel domain; PDBTitle: crystal structure of putative flavin reductase with split barrel2 domain (yp_750721.1) from shewanella frigidimarina ncimb 400 at 1.743 a resolution Phyre2 PDB 2r6v chain A Region: 7 - 189 Aligned: 174 Modelled: 182 Confidence: 100.0% Identity: 29% PDB header:flavoprotein Chain: A: PDB Molecule:uncharacterized protein ph0856; PDBTitle: crystal structure of fmn-binding protein (np_142786.1) from pyrococcus2 horikoshii at 1.35 a resolution Phyre2 PDB 3e4v chain A Region: 5 - 189 Aligned: 172 Modelled: 185 Confidence: 100.0% Identity: 26% PDB header:flavoprotein Chain: A: PDB Molecule:nadh:fmn oxidoreductase like protein; PDBTitle: crystal structure of nadh:fmn oxidoreductase like protein in complex2 with fmn (yp_544701.1) from methylobacillus flagellatus kt at 1.40 a3 resolution Phyre2 PDB 2d5m chain A Region: 5 - 186 Aligned: 174 Modelled: 182 Confidence: 100.0% Identity: 28% PDB header:electron transport Chain: A: PDB Molecule:flavoredoxin; PDBTitle: flavoredoxin of desulfovibrio vulgaris (miyazaki f) Phyre2 PDB 3bnk chain B Region: 13 - 186 Aligned: 166 Modelled: 172 Confidence: 100.0% Identity: 26% PDB header:electron transport Chain: B: PDB Molecule:flavoredoxin; PDBTitle: x-ray crystal structure of flavoredoxin from methanosarcina2 acetivorans Phyre2 PDB 1usc chain A Region: 1 - 188 Aligned: 177 Modelled: 187 Confidence: 100.0% Identity: 19% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: NADH:FMN oxidoreductase-like Phyre2 PDB 3k87 chain B Region: 3 - 183 Aligned: 159 Modelled: 168 Confidence: 100.0% Identity: 14% PDB header:oxidoreductase Chain: B: PDB Molecule:chlorophenol-4-monooxygenase component 1; PDBTitle: crystal structure of nadh:fad oxidoreductase (tftc) - fad2 complex Phyre2 PDB 3rh7 chain A Region: 2 - 185 Aligned: 159 Modelled: 167 Confidence: 100.0% Identity: 21% PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical oxidoreductase; PDBTitle: crystal structure of a hypothetical oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution Phyre2 PDB 3pft chain A Region: 3 - 183 Aligned: 156 Modelled: 166 Confidence: 100.0% Identity: 21% PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase; PDBTitle: crystal structure of untagged c54a mutant flavin reductase (dszd) in2 complex with fmn from mycobacterium goodii Phyre2 PDB 1wgb chain A Region: 9 - 181 Aligned: 153 Modelled: 158 Confidence: 100.0% Identity: 22% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: NADH:FMN oxidoreductase-like Phyre2 PDB 3nfw chain B Region: 4 - 184 Aligned: 158 Modelled: 178 Confidence: 100.0% Identity: 18% PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b; PDBTitle: crystal structure of nitrilotriacetate monooxygenase component b2 (a0r521 homolog) from mycobacterium thermoresistibile Phyre2 PDB 2r0x chain A Region: 5 - 182 Aligned: 155 Modelled: 165 Confidence: 100.0% Identity: 14% PDB header:oxidoreductase Chain: A: PDB Molecule:possible flavin reductase; PDBTitle: crystal structure of a putative flavin reductase (ycdh, hs_1225) from2 haemophilus somnus 129pt at 1.06 a resolution Phyre2 PDB 3cb0 chain B Region: 1 - 182 Aligned: 161 Modelled: 182 Confidence: 100.0% Identity: 19% PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxyphenylacetate 3-monooxygenase; PDBTitle: cobr Phyre2 PDB 2qck chain A Region: 9 - 184 Aligned: 150 Modelled: 158 Confidence: 100.0% Identity: 15% PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase domain protein; PDBTitle: crystal structure of flavin reductase domain protein (yp_831077.1)2 from arthrobacter sp. fb24 at 1.90 a resolution Phyre2 PDB 1i0r chain A Region: 10 - 185 Aligned: 155 Modelled: 161 Confidence: 100.0% Identity: 18% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: NADH:FMN oxidoreductase-like Phyre2 PDB 1rz0 chain A Region: 5 - 184 Aligned: 152 Modelled: 158 Confidence: 100.0% Identity: 17% Fold: Split barrel-like Superfamily: FMN-binding split barrel Family: NADH:FMN oxidoreductase-like Phyre2 PDB 2d38 chain A Region: 9 - 183 Aligned: 150 Modelled: 170 Confidence: 100.0% Identity: 15% PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical nadh-dependent fmn oxidoreductase; PDBTitle: the crystal structure of flavin reductase hpac complexed with nadp+ Phyre2 1 d1ejea_ 2 c3hmzA_ 3 c3bpkB_ 4 c3fgeA_ 5 c2r6vA_ 6 c3e4vA_ 7 c2d5mA_ 8 c3bnkB_ 9 d1usca_ 10 c3k87B_ 11 c3rh7A_ 12 c3pftA_ 13 d1wgba_ 14 c3nfwB_ 15 c2r0xA_ 16 c3cb0B_ 17 c2qckA_ 18 d1i0ra_ 19 d1rz0a_ 20 c2d38A_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ejea_ 100.0 25 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 2 c3hmzA_ 100.0 40 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase domain protein, fmn-binding; PDBTitle: crystal structure of a fmn-binding domain of flavin reductases-like2 enzyme (sbal_0626) from shewanella baltica os155 at 1.50 a resolution 3 c3bpkB_ 100.0 18 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b; PDBTitle: crystal structure of nitrilotriacetate monooxygenase2 component b from bacillus cereus 4 c3fgeA_ 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:putative flavin reductase with split barrel domain; PDBTitle: crystal structure of putative flavin reductase with split barrel2 domain (yp_750721.1) from shewanella frigidimarina ncimb 400 at 1.743 a resolution 5 c2r6vA_ 100.0 29 PDB header:flavoprotein Chain: A: PDB Molecule:uncharacterized protein ph0856; PDBTitle: crystal structure of fmn-binding protein (np_142786.1) from pyrococcus2 horikoshii at 1.35 a resolution 6 c3e4vA_ 100.0 26 PDB header:flavoprotein Chain: A: PDB Molecule:nadh:fmn oxidoreductase like protein; PDBTitle: crystal structure of nadh:fmn oxidoreductase like protein in complex2 with fmn (yp_544701.1) from methylobacillus flagellatus kt at 1.40 a3 resolution 7 c2d5mA_ 100.0 28 PDB header:electron transport Chain: A: PDB Molecule:flavoredoxin; PDBTitle: flavoredoxin of desulfovibrio vulgaris (miyazaki f) 8 c3bnkB_ 100.0 26 PDB header:electron transport Chain: B: PDB Molecule:flavoredoxin; PDBTitle: x-ray crystal structure of flavoredoxin from methanosarcina2 acetivorans 9 d1usca_ 100.0 19 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 10 c3k87B_ 100.0 14 PDB header:oxidoreductase Chain: B: PDB Molecule:chlorophenol-4-monooxygenase component 1; PDBTitle: crystal structure of nadh:fad oxidoreductase (tftc) - fad2 complex 11 c3rh7A_ 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical oxidoreductase; PDBTitle: crystal structure of a hypothetical oxidoreductase (sma0793) from2 sinorhizobium meliloti 1021 at 3.00 a resolution 12 c3pftA_ 100.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase; PDBTitle: crystal structure of untagged c54a mutant flavin reductase (dszd) in2 complex with fmn from mycobacterium goodii 13 d1wgba_ 100.0 22 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 14 c3nfwB_ 100.0 18 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase component b; PDBTitle: crystal structure of nitrilotriacetate monooxygenase component b2 (a0r521 homolog) from mycobacterium thermoresistibile 15 c2r0xA_ 100.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:possible flavin reductase; PDBTitle: crystal structure of a putative flavin reductase (ycdh, hs_1225) from2 haemophilus somnus 129pt at 1.06 a resolution 16 c3cb0B_ 100.0 19 PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxyphenylacetate 3-monooxygenase; PDBTitle: cobr 17 c2qckA_ 100.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase domain protein; PDBTitle: crystal structure of flavin reductase domain protein (yp_831077.1)2 from arthrobacter sp. fb24 at 1.90 a resolution 18 d1i0ra_ 100.0 18 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 19 d1rz0a_ 100.0 17 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:NADH:FMN oxidoreductase-like 20 c2d38A_ 100.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical nadh-dependent fmn oxidoreductase; PDBTitle: the crystal structure of flavin reductase hpac complexed with nadp+ 21 c2ecrA_ not modelled 100.0 17 PDB header:oxidoreductase Chain: A: PDB Molecule:flavin reductase component (hpac) of 4-hydroxyphenylacetate PDBTitle: crystal structure of the ligand-free form of the flavin reductase2 component (hpac) of 4-hydroxyphenylacetate 3-monooxygenase 22 c3b5mD_ not modelled 99.9 18 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of conserved uncharacterized protein from2 rhodopirellula baltica 23 d2imla1 not modelled 99.6 14 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 24 d2ptfa1 not modelled 98.9 15 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 25 c2ptfB_ not modelled 98.9 14 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein mth_863; PDBTitle: crystal structure of protein mth_863 from methanobacterium2 thermoautotrophicum bound to fmn 26 d2nr4a1 not modelled 98.7 13 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:MTH863-like 27 c2q9kA_ not modelled 97.6 11 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative oxidoreductase (exig_1997) from2 exiguobacterium sibiricum 255-15 at 1.59 a resolution 28 d1flma_ not modelled 96.1 10 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 29 c2htdB_ not modelled 95.9 11 PDB header:oxidoreductase Chain: B: PDB Molecule:predicted flavin-nucleotide-binding protein from cog3576 PDBTitle: crystal structure of a putative pyridoxamine 5'-phosphate oxidase2 (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution 30 d2asfa1 not modelled 95.4 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 31 d1vl7a_ not modelled 94.7 16 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 32 c2re7A_ not modelled 94.7 10 PDB header:oxidoreductase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase related2 protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a3 resolution 33 d2hq7a1 not modelled 94.7 17 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 34 c2iabB_ not modelled 94.4 6 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with fmn-binding split barrel fold2 (np_828636.1) from streptomyces avermitilis at 2.00 a resolution 35 c3f7eB_ not modelled 93.7 7 PDB header:unknown function Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn- PDBTitle: msmeg_3380 f420 reductase 36 d2fhqa1 not modelled 93.3 13 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 37 c2hhzA_ not modelled 93.2 14 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related2 protein (ssuidraft_2804) from streptococcus suis 89/1591 at 2.00 a3 resolution 38 d1rfea_ not modelled 92.4 7 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 39 d1w9aa_ not modelled 92.1 3 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 40 d2i02a1 not modelled 87.9 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 41 c2htiA_ not modelled 85.0 13 PDB header:fmn-binding protein Chain: A: PDB Molecule:bh0577 protein; PDBTitle: crystal structure of a flavin-nucleotide-binding protein (bh_0577)2 from bacillus halodurans at 2.50 a resolution 42 d2htia1 not modelled 85.0 13 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 43 d2fg9a1 not modelled 77.7 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 44 d2arza1 not modelled 77.5 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 45 c2ig6B_ not modelled 77.5 13 PDB header:oxidoreductase Chain: B: PDB Molecule:nimc/nima family protein; PDBTitle: crystal structure of a nimc/nima family protein (ca_c2569) from2 clostridium acetobutylicum at 1.80 a resolution 46 c3dmbA_ not modelled 73.4 10 PDB header:oxidoreductase Chain: A: PDB Molecule:putative general stress protein 26 with a pnp-oxidase like PDBTitle: crystal structure of a putative general stress family protein2 (xcc2264) from xanthomonas campestris pv. campestris at 2.30 a3 resolution 47 c3db0B_ not modelled 70.9 13 PDB header:oxidoreductase Chain: B: PDB Molecule:lin2891 protein; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution 48 d1xhna1 not modelled 62.7 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 49 c3ec6A_ not modelled 62.7 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 26; PDBTitle: crystal structure of the general stress protein 26 from bacillus2 anthracis str. sterne 50 c3dnhB_ not modelled 60.2 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein atu2129; PDBTitle: the crystal structure of the protein atu2129 (unknown function) from2 agrobacterium tumefaciens str. c58 51 d1dnla_ not modelled 56.2 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 52 d2hq9a1 not modelled 38.5 5 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 53 c3h96B_ not modelled 28.4 7 PDB header:flavoprotein Chain: B: PDB Molecule:f420-h2 dependent reductase a; PDBTitle: msmeg_3358 f420 reductase 54 d1t9ma_ not modelled 28.1 11 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 55 c3gasA_ not modelled 25.9 8 PDB header:oxidoreductase Chain: A: PDB Molecule:heme oxygenase; PDBTitle: crystal structure of helicobacter pylori heme oxygenase hugz2 in complex with heme 56 d1ty9a_ not modelled 23.7 19 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 57 d1nrga_ not modelled 17.3 6 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 58 c1nrgA_ not modelled 17.3 6 PDB header:oxidoreductase Chain: A: PDB Molecule:pyridoxine 5'-phosphate oxidase; PDBTitle: structure and properties of recombinant human pyridoxine-5'-phosphate2 oxidase 59 d2fura1 not modelled 11.4 8 Fold:Split barrel-like Superfamily:FMN-binding split barrel Family:PNP-oxidase like 60 c3fkhB_ not modelled 9.4 11 PDB header:oxidoreductase Chain: B: PDB Molecule:putative pyridoxamine 5'-phosphate oxidase; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_601736.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.51 a resolution 61 c2qeaB_ not modelled 9.4 8 PDB header:oxidoreductase Chain: B: PDB Molecule:putative general stress protein 26; PDBTitle: crystal structure of a putative general stress protein 26 (jann_0955)2 from jannaschia sp. ccs1 at 2.46 a resolution 62 c2ou5B_ not modelled 7.5 6 PDB header:flavoprotein Chain: B: PDB Molecule:pyridoxamine 5'-phosphate oxidase-related, fmn-binding; PDBTitle: crystal structure of a pyridoxamine 5'-phosphate oxidase-related fmn-2 binding protein (jann_0254) from jannaschia sp. ccs1 at 1.60 a3 resolution 63 c3in6A_ not modelled 7.4 15 PDB header:flavoprotein Chain: A: PDB Molecule:fmn-binding protein; PDBTitle: crystal structure of a fmn-binding protein (swol_0183) from2 syntrophomonas wolfei subsp. wolfei at 2.12 a resolution 64 d1vlma_ not modelled 6.3 30 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:UbiE/COQ5-like 65 c1kl9A_ not modelled 6.3 17 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 2 subunit 1; PDBTitle: crystal structure of the n-terminal segment of human eukaryotic2 initiation factor 2alpha 66 c1u24A_ not modelled 5.8 22 PDB header:hydrolase Chain: A: PDB Molecule:myo-inositol hexaphosphate phosphohydrolase; PDBTitle: crystal structure of selenomonas ruminantium phytase 67 c1q8kA_ not modelled 5.8 14 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 2 PDBTitle: solution structure of alpha subunit of human eif2 68 c3e23A_ not modelled 5.6 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rpa2492; PDBTitle: crystal structure of the rpa2492 protein in complex with2 sam from rhodopseudomonas palustris, northeast structural3 genomics consortium target rpr299 69 d1f8ya_ not modelled 5.5 19 Fold:Flavodoxin-like Superfamily:N-(deoxy)ribosyltransferase-like Family:N-deoxyribosyltransferase 70 d1kl9a2 not modelled 5.3 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 71 c2zfuA_ not modelled 5.1 29 PDB header:nuclear protein Chain: A: PDB Molecule:cerebral protein 1; PDBTitle: structure of the methyltransferase-like domain of nucleomethylin

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0