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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | P | I | E | L | H | H | A | S | R | L | L | N | H | G | P | T | V | L | I | T | S | F | D | E | Q | S | Q | R | R | N | I | M | A | A | A | W | S | M | P | V | E | F | E | P | P | R | V | A | I | V | V | D | K | S | T | W | T | R | E | L | I | E | H | N | G | K | F | G | I | V | I | P | G | V | A | A | T | N | W |
Query Conservation |   |
  |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |
Alig confidence |   |
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| . |
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Template Conservation |   |
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|   |   |   |   | . |   |   |   |
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|   |   |   | . | . |   |
|   |   |   |   |   |
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Template Sequence |   |
D | D | R | L | F | R | N | A | X | G | K | F | . |
A | T | G | V | T | V | I | T | T | E | L | . |
. |
N | G | A | V | H | G | X | T | A | N | A | F | X | S | V | S | L | N | P | K | L | V | L | V | S | I | G | E | K | A | K | X | L | E | K | I | Q | Q | S | K | K | Y | A | V | N | I | L | S | Q | D | Q | K | V | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T | S | . |
| B |
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|  |  |  |  |  |  |  | . | . | T | T |  |  |  |  |  |  |  |
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|  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
| B | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
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| . |
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| . | . |
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Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | |
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. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | W | A | V | G | S | V | S | G | R | D | E | D | K | F | N | C | Y | G | I | P | V | V | R | G | P | V | F | G | L | P | L | V | E | E | K | C | L | A | W | M | E | C | R | L | L | P | A | T | S | A | Q | E | E | Y | D | T | L | F | G | E | V | V | S | A | A | A | D | A | R | V | F | V | E | G | R | W | Q | F | D |
Query Conservation |   |
  |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|   |   | . |   |   |   |   |
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|   |   |   |   |   |   | . |
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|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
S | X | N | F | A | G | Q | L | E | K | P | V | D | . |
. |
. |
. |
. |
. |
. |
. |
V | Q | F | E | E | L | G | G | L | P | V | I | K | D | . |
A | L | A | Q | I | S | C | Q | V | V | N | E | V | Q | A | . |
G | D | H | T | L | F | I | G | E | V | T | D | I | K | I | T | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  | T | T | T |
| S | S | S |
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|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  | T | T |  |  |  |  | T | T | . |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
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| . | . | . | . | . | . | . | . |
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|  |  |
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| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
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  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
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. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
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  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |
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|  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
D | D | K | L | N | T | L | H | H | L | G | A | G | T | F | V | T | S | G | K |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
Alig confidence |   |
. | . | . | . |
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| . |
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Template Conservation |   |
. | . | . | . |   |
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| . |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
. |
. |
. |
. |
D | P | L | L | F | . |
F | S | G | K | Y | H | Q | L | A | Q |
Template Known Secondary structure |   |
. | . | . | . |
| B |
|  |  | . |  | T | T |  |  |  |
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Template Predicted Secondary structure |   |
. | . | . | . |
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|  |  | . |  |
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Template SS confidence |   |
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  |   |
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139 | 140 | . | . | . | |
. | . | . | . | . | . | 150 | . | . | . |
  |