Return to main results Retrieve Phyre Job Id

Job DescriptionP76121
Confidence100.00%DateThu Jan 5 12:19:13 GMT 2012
Rank6Aligned Residues172
% Identity26%Templatec3e4vA_
PDB info PDB header:flavoproteinChain: A: PDB Molecule:nadh:fmn oxidoreductase like protein; PDBTitle: crystal structure of nadh:fmn oxidoreductase like protein in complex2 with fmn (yp_544701.1) from methylobacillus flagellatus kt at 1.40 a3 resolution
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  IPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNW
Query Conservation         
 
 
 
 

 



     
  
    
    

  

 
 
 
     
   
  
  
 



       
Alig confidence 

























.




















































Template Conservation          
  
 
 

 



   
.
  
    
     
  

 
 
 
     
   
     
 



       
Template Sequence  NELPPENAYRILESGPIVLVSTRGAD. GRANLXTXGFHXXXQHEPPLVGAIIGPWDYSHQALSETGECVLAVPTVDLAET
Template Known Secondary structure 

GGGGTT



TT.S


TTTT

TTST


GGG
Template Predicted Secondary structure 












.



















Template SS confidence 















































































   3......10.........20........ .30.........40.........50.........60.........70.........80.
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  TWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFD
Query Conservation      
  

   

     
          
 
 
 
 
 


 
       


 
 




   
            
Alig confidence 


































.














.
















..........
Template Conservation         
    


               
 
  .
 
  

 
      .


 
 



     
 .......... 
Template Sequence  VVDIGNCSGDALDKFGHFGLTPVPAQTVDAPLVRQ. CWANLECRVVDDGWA. RRYNLWVLEVQRIWIDT. . . . . . . . . . A
Template Known Secondary structure  TTS
TTS

T



SS
SS
TT.SS
TT.S
T..........T
Template Predicted Secondary structure 


















.


.



..........
Template SS confidence 















































































   82.......90.........100.........110...... ...120.........130. ........140........ .
 
   165....170.........180.........
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  DDKLNTLHHLGAGTFVTSGKRVTAG
Query Conservation       

   
   
   
      
Alig confidence 
























Template Conservation        
     
     
      
Template Sequence  RKETRLIHHQGDGRFSVDGDTLDLG
Template Known Secondary structure 
S




STT







G
Template Predicted Secondary structure 











Template SS confidence 
























   150.........160.........170....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions