|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | P | I | E | L | H | H | A | S | R | L | L | N | H | G | P | T | V | L | I | T | S | F | D | E | Q | S | Q | R | R | N | I | M | A | A | A | W | S | M | P | V | E | F | E | P | P | R | V | A | I | V | V | D | K | S | T | W | T | R | E | L | I | E | H | N | G | K | F | G | I | V | I | P | G | V | A | A | T | N | W |
Query Conservation |   |
  |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |
Alig confidence |   |
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| . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |
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|   |   |   |   |   | . |   | . |   |   |   |
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Template Sequence |   |
E | V | S | Q | F | K | D | A | X | A | Q | . |
L | A | S | A | V | H | I | V | T | T | S | G | E | T | . |
G | . |
Q | H | G | F | T | A | S | A | V | C | S | V | T | D | S | P | P | T | L | L | V | C | I | N | S | N | A | R | A | Y | E | H | F | V | K | N | R | V | L | X | V | N | T | L | T | A | E | Q | S | S | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T | . | S |
|  |  |
|  |  |  |  |  |  |
| S | S | . |
| . |  |  |  |  |  |  | S |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | S | T | T |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
| B | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
| . |
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| . |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | W | A | V | G | S | V | S | G | R | D | E | D | K | F | N | C | Y | G | I | P | V | V | R | G | P | V | F | G | L | P | L | V | E | E | K | C | L | A | W | M | E | C | R | L | L | P | A | T | S | A | Q | E | E | Y | D | T | L | F | G | E | V | V | S | A | A | A | D | A | R | V | F | V | E | G | R | W | Q | F | D |
Query Conservation |   |
  |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . |
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| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   | . |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   | . | . | . |
|   |
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|   |   | . |
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|   |   |   |   |   |   | . |
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|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
S | N | I | F | A | . |
S | P | L | S | Q | E | E | R | F | S | N | A | S | W | T | T | L | T | T | . |
. |
. |
G | S | P | X | L | Q | D | . |
A | L | I | N | F | D | C | E | I | T | E | I | K | H | V | . |
G | T | H | D | I | L | I | C | K | I | V | D | I | H | Q | S | N | A | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  | T | . | S | S |
|
|  |  |  |  |  | T | T | S |
|  |  |
| S | S | S | . | . | . | S |
|
|  |  | T | T | . |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
| . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |
| . |
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| . | . | . |
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| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
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  |   |
80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
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|
. | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
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  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
D | D | K | L | N | T | L | H | H | L | G | A | G | T | F | V | T | S |
Query Conservation |   |
  |   |   |   |   |
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|   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
. | . | . | . |
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| . |
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Template Conservation |   |
. | . | . | . |   |
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|   |
| . |   |   |   |   |
|   |   |
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Template Sequence |   |
. |
. |
. |
. |
N | A | L | V | Y | . |
R | N | R | V | Y | H | S | V |
Template Known Secondary structure |   |
. | . | . | . |
| B |  |  |  | . |  | T | T |  |  |  |  |
|
Template Predicted Secondary structure |   |
. | . | . | . |
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|  |  | . |  |
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|  |  |  |  |
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Template SS confidence |   |
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  |   |
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145 | . | . | . | . | |
150 | . | . | . | . | . | . | . |
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