Job Description P37056 Confidence 99.95% Date Thu Jan 5 11:54:44 GMT 2012 Rank 1 Aligned Residues 143 % Identity 27% Template c3kw0D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:cysteine peptidase; PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution Resolution 2.50 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																											.	.	.					.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.					.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	D	L	K	P	G	D	L	L	F	S	S	S	L	G	V	T	S	F	G	I	R	V	F	S	T	S	S	V	S	H	V	A	I	F	L	G	D	N	N	.	.	.	V	A	E	A	.	T	G	A	G	V	Q	I	V	S	L	K	K	A	M	K	H	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.					.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.					.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	V	L	K	T	G	D	I	F	L	C	S	G	N	Y	L	V	S	K	L	I	K	K	V	S	E	S	X	F	S	H	T	G	I	I	V	K	W	G	E	H	T	L	I	X	E	S	V	E	D	D	G	V	R	I	V	P	L	E	H	Y	I	K	N	Y	E	N	S	N	N	R	Y	N	G	S	L	F	I	A
Template Known Secondary structure		T	T	T			T	T									S											T	S	S											T	T									T	T	T							T							G	G	G	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	F	V	L	R	V	P	D	L	T	P	Q	Q	A	T	D	I	T	A	F	A	N	K	I	K	D	S	G	Y	N	Y	R	G	I	V	E	F	I	P	F	M	V	T	R	Q	M	C	S	L	N	P	F	S	E	D	F	R	Q	Q	C	V	S	G	L	A	K	A	Q	L	S	S	V	G	E	G	D	K	K	S
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	H	E	L	L	Q	N	V	N	D	D	S	E	X	I	R	N	L	I	K	V	G	F	S	L	L	N	S	G	Y	D	K	N	E	I	A	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	I	G	L	G	I	G	R	H	E	D	N	N	E
Template Known Secondary structure				G	G	G	T	T	S		T	T	S																S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T					T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																											.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	C	S	E	F	V	T	D	A	F	A	K	A	G	H	P	L	T	L	A	Q	S	G	W	I	S	P	A	D	L	M
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		Y	I	C	S	E	F	V	N	E	C	F	K	K	I	G	V	E	F	F	.	.	.	.	.	.	I	F	P	E	H	I	A
Template Known Secondary structure														T	T	T					.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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