Return to main results Retrieve Phyre Job Id

Job DescriptionP37056
Confidence99.87%DateThu Jan 5 11:54:44 GMT 2012
Rank9Aligned Residues96
% Identity25%Templatec3gt2A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.... .....30.........40.........50.........60.........70....
Predicted Secondary structure 





...........

























Query SS confidence 


















. . . . . . . . . . .

















































Query Sequence  AYCRLFLPSFLLLSACTVD. . . . . . . . . . . ISQPDPSATAVDAEAKTWAVKFQHQSSFTEQSIKEITAPDLKPGDLLFSS
Query Conservation                     ........... 
  



          

 


 
  
   
  
    
 





  
Alig confidence 


















...........















.
































Template Conservation    
   

 

 


                 







   
  . 

 


 
      
  
      





  
Template Sequence  ARGLSQRGVPFSWAGGGINGPTRGTGTGANTVGFDASGLXQYAYAG. AGIKLPRSSGAXYRVGQKILPQQARKGDLIFYG
Template Known Secondary structure  TTTT
BB
TT

BTTB

SGGGTT
B
T.TT



SSTTSS
GGG

TT
S
Template Predicted Secondary structure 


























.


















Template SS confidence 















































































   84.....90.........100.........110.........120......... 130.........140.........150.........160..
 
   75....80.........90.........100.........110......
Predicted Secondary structure 




















Query SS confidence 









































Query Sequence  SLGVTSFGIRVFSTSSVSHVAIFLGDNNVAEATGAGVQIVSL
Query Conservation       
  

  
 
  


 



    


   

 
  
Alig confidence 



.............














.








Template Conservation      ............. 






 
  


.
  
 
  
Template Sequence  PEGT. . . . . . . . . . . . . QSVAXYLGNNQXLEV. GDVVQVSPV
Template Known Secondary structure  GGG
.............STT.SSB
Template Predicted Secondary structure 



.............





.


Template SS confidence 









































   163... ...170.........180. ........190
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions