Job Description P0AEI1 Confidence 76.06% Date Thu Jan 5 11:23:24 GMT 2012 Rank 61 Aligned Residues 225 % Identity 12% Template d1k77a_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Hypothetical protein YgbM (EC1530) Resolution 1.63

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	M	I	N	S	V	R	G	D	R	S	P	V	V	D	I	S	F	P	E	I	E	K	F	D	R	L	P	E	P	R	A	E	G	P	T	A	F	V	S	I	M	E	G	C	N	K	Y	C	T	Y	C	V	V	P	Y	T	R	G	E	E	V	S	R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	E	R	F	A	A	A	R	K	A	G	F	D	A	V	E	F	L	F	P	Y	N	Y	S	T	L	Q	I	Q	K	Q	L	E	Q	N	H	L	T	L	A	L	F	N	T	A	P	G	D	I	N	A	G	E	W	G	L	S	A	L	P	G	R	E	H	E	A	H	A	D	I	D	L	A	L	E	Y	A	L	A
Template Known Secondary structure		G	G	G									T		S					S			T	T	S												T	T													G	G	G	T		S		S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																							.	.																			.	.	.	.	.	.	.
Query SS confidence																																							.	.																			.	.	.	.	.	.	.
Query Sequence		Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	.	.	I	D	G	I	D	R	I	R	F	T	T	S	H	P	I	E	F	T	.	.	.	.	.	.	.	D	D	I	I	E	V	Y	R	D	T	P	E	L	V	S	F
Query Conservation																																							.	.																			.	.	.	.	.	.	.
Alig confidence																.	.																						.	.																			.	.	.	.	.	.	.												.	.
Template Conservation																.	.																																																												.	.
Template Sequence		L	N	C	E	Q	V	H	V	X	A	G	V	V	P	.	.	A	G	E	D	A	E	R	Y	R	A	V	F	I	D	N	I	R	Y	A	A	D	R	F	A	P	H	G	K	R	I	L	V	E	A	L	S	P	G	V	K	P	H	Y	L	F	S	S	Q	Y	Q	A	L	A	I	V	E	E	V	A	.	.	R	D	N
Template Known Secondary structure		T	T		S								B			.	.	T	T	S																					G	G	G	T										T	T	T	S	T	T	B	S			S													.	.		T	T
Template Predicted Secondary structure																.	.																																																												.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	F	I	V	G	F	P	G	E	T	T	E	D	F	E	K	T	M	K	L	I	A	D	V	N	F	D	M	S	Y	S	F	I	F	S	A	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		V	F	I	Q	L	D	T	F	H	A	Q	K	V	D	.	.	.	.	.	.	.	.	G	N	L	T	H	L	I	R	D	Y	A	G	K	Y	A	H	V	Q	I	A	G	L	P	D	R	H	E	P	D	D	G	E	I	N	Y	P	W	L	F	R	L	F	D	E	V	G	Y	Q	G	W	I	G	C	E	Y	K	P	R
Template Known Secondary structure															T	.	.	.	.	.	.	.	.										T	T	T	S									T	T	T				S	S	S	S	S	S												T	T			S									S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		342	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	T	P	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	T	E	E	G
Template Known Secondary structure		S		T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions