Job Description P0AEI1 Confidence 60.36% Date Thu Jan 5 11:23:24 GMT 2012 Rank 92 Aligned Residues 224 % Identity 13% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	M	I	N	S	V	R	G	D	R	S	P	V	V	D	I	S	F	P	E	I	E	K	F	D	R	L	P	E	P	R	A	E	G	P	T	A	F	V	S	I	M	E	G	C	N	K	Y	C	T	Y	C	V	V	P	Y	T	R	G	E	E	V	S	R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	E	R	F	R	L	A	A	E	A	G	F	G	G	V	E	F	L	F	P	Y	D	F	D	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A	A	G	E	R	G	M	A	A	I	S	G	R	E	Q	E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A
Template Known Secondary structure												T	T		S					S			T	T	S												T	T											S		T	T	T	T			B		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																		.	.	.	.	.	.							.	.	.
Query SS confidence																																																		.	.	.	.	.	.							.	.	.
Query Sequence		Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	I	D	G	I	D	R	I	R	F	T	T	.	.	.	.	.	.	S	H	P	I	E	F	.	.	.	T	D	D	I	I	E	V	Y	R	D	T	P	E	L	V	S	F
Query Conservation																																																		.	.	.	.	.	.							.	.	.
Alig confidence												.	.	.																																				.	.	.	.	.	.							.	.	.													.	.
Template Conservation												.	.	.																																																															.	.
Template Sequence		L	D	C	R	T	L	H	A	M	S	.	.	.	G	I	T	E	G	L	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G	Y	F	I	V	H	Q	L	E	A	V	G	L	V	K	R	V	N	.	.	R	P	N
Template Known Secondary structure		T	T								B	.	.	.		B		T	T	S																					G	G	G	T										T	T	T	S	T	T	B	S																.	.		T	T
Template Predicted Secondary structure												.	.	.																																																															.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	F	I	V	G	F	P	G	E	T	T	E	D	F	E	K	T	M	K	L	I	A	D	V	N	F	D	M	S	Y	S	F	I	F	S	A	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	.	.	.	.	.	.	.	.	G	D	L	T	R	L	I	E	K	M	N	G	A	F	S	H	V	Q	I	A	S	V	P	D	R	H	E	P	D	E	G	E	L	N	Y	P	Y	L	F	S	V	L	E	S	V	G	Y	R	G	W	V	G	C	E	Y	N	P	R
Template Known Secondary structure															T	.	.	.	.	.	.	.	.										T	T	T	S									T	T	T				T	T	S	S	S													T	T			S									S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		342	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	T	P	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	T	E	S	G
Template Known Secondary structure		S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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