Job Description P0AEI1 Confidence 20.60% Date Thu Jan 5 11:23:24 GMT 2012 Rank 266 Aligned Residues 187 % Identity 7% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.
Predicted Secondary structure																																		.	.																																					.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																																					.	.	.	.	.	.	.	.
Query Sequence		V	S	R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A	Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	.	.	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	I	D	G	I	D	R	I	R	F	T	T	S	H	P	.	.	.	.	.	.	.	.	I	E
Query Conservation																																		.	.																																					.	.	.	.	.	.	.	.
Alig confidence																																		.	.																																		.			.	.	.	.	.	.	.	.
Template Conservation																																																																					.
Template Sequence		R	A	A	A	F	E	L	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N	P	D	V	K	F	A	I	E	Y	.	K	P	R	E	P	R	V	K	X	T	W	D
Template Known Secondary structure																				T		S							T	T				S	S	T	T	S	S																			T		T	T	S							.		S		S	S	S	S			S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.										.	.	310	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.
Query Sequence		F	T	D	D	I	I	E	V	Y	R	D	T	P	E	L	V	S	F	L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	F	I	.	.	.	.	.	.	.	.	.	V	G	F	P	G	E	T
Query Conservation																																																																		.	.	.	.	.	.	.	.	.
Alig confidence															.	.																	.	.	.	.	.	.	.	.															.	.										.	.	.	.	.	.	.	.	.
Template Conservation															.	.																	.	.	.	.	.	.	.	.															.	.
Template Sequence		S	A	A	R	T	L	L	G	I	E	D	I	G	.	.	L	D	N	V	G	V	L	L	D	F	G	H	A	L	Y	G	.	.	.	.	.	.	.	.	G	E	S	P	A	D	S	A	Q	L	I	I	D	R	.	.	G	R	L	F	G	X	D	V	N	D	N	L	R	G	W	D	D	D	L	V	V	G	T	V	H
Template Known Secondary structure		S												T	.	.		T	T													T	.	.	.	.	.	.	.	.	T													T	.	.	T							B		B			S	S	S				B		T	T	S	S
Template Predicted Secondary structure															.	.																	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	D	F	E	K	T	M	K	L	I	A	D	V	N	F	D	M	S	Y	S	F	I	F	S	A	R	P	G	T	P	A	A	D	M	V	D	D	V	P	E	E	E	K	K	Q	R	L	Y	I	L	Q	E	R	I	N	Q	Q	A	M	A	W	S	R	R
Query Conservation
Alig confidence																																									.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		X	T	E	I	F	E	F	F	Y	V	L	K	I	N	N	W	Q	G	V	W	Q	L	D	Q	F	P	F	R	E	N	H	V	E	A	A	Q	L	S	I	.	.	.	.	.	.	R	F	L	K	H	I	Y	R	A	L	D	K	L	D	I	P	A	L	Q	A
Template Known Secondary structure															T	T												T	T	S											.	.	.	.	.	.													S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.							.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions