Job Description P0AEI1 Confidence 46.42% Date Thu Jan 5 11:23:24 GMT 2012 Rank 122 Aligned Residues 104 % Identity 12% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	Y	D	S	S	K	M	A	D	L	L	D	A	T	H	G	Y	Q	L	T	D	V	A	E	E	A	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	L	L	N	T	C	S	I	R	E	K	A	Q	E	K	V	F	H	Q	L	G	R	W	K	L	L	K	E	K	N	P	D	L	I	I	G	V	G	G
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.												.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																	.																																						.	.	.	.	.	.	.
Template Sequence		H	P	L	A	I	A	A	I	R	N	L	L	I	K	N	.	D	I	E	I	L	A	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	.	.	.	.	.	.	.	I	Q	V	L	E	T	L	R	K	R	Q	Y	S	G	I	I	I	I	V	S
Template Known Secondary structure																T	.	T								S	S	S	T	T											S						T	T		S	S	S			.	.	.	.	.	.	.										T	T			S
Template Predicted Secondary structure																	.																																						.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	A	S	Q	E	G	E	H	I	R	Q	R	A	H	Y	V	D	I	I	F	G	P	Q	T	L	H	R	L	P	E	M	I	N	S	V	R	G	D	R	S	P	V	V	D
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		A	K	D	H	F	Y	G	K	H	C	A	D	.	A	G	A	N	G	F	V	S	K	K	E	G	M	N	N	I	I	A	A	I	E	A	A	K	N	G	Y	C	Y	F	P	F
Template Known Secondary structure						S	T							.	T	T		S					G	G	G		T												T	T			B
Template Predicted Secondary structure														.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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