Job Description P0AEI1 Confidence 36.62% Date Thu Jan 5 11:23:24 GMT 2012 Rank 156 Aligned Residues 59 % Identity 19% Template c3cuqA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.61 Å

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		271	.	.	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		D	R	I	L	N	L	M	G	R	.	.	.	.	.	.	.	T	H	T	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	.	.	.	.	F	I	V	G	F	P	G	E	T	T	E	D	F	E	K	T	M	K	L	I	A	D	V	N
Query Conservation											.	.	.	.	.	.	.																											.	.	.	.
Alig confidence											.	.	.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		E	E	L	H	Q	Q	V	L	K	G	R	G	K	F	A	Q	D	V	S	Q	D	D	L	I	R	A	I	K	K	L	K	A	L	G	T	G	F	G	I	I	P	V	G	G	T	Y	L	I	Q	S	V	P	A	E	L	N	M	D	H	T	V	V	L	Q	L	A	E	K	N	G
Template Known Secondary structure											T	T	T	T			S	S														G	G	G	S	T	T							T	T							S																T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions