Job Description P0AEI1 Confidence 22.65% Date Thu Jan 5 11:23:24 GMT 2012 Rank 244 Aligned Residues 108 % Identity 7% Template c3cfyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative luxo repressor protein; PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.							.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.							.	.	.	.	.	.	.	.	.
Query Sequence		M	T	K	K	L	H	I	K	T	W	G	C	Q	M	N	E	Y	D	S	S	K	M	A	D	L	L	D	A	T	H	G	Y	Q	L	T	.	.	D	V	A	E	E	A	.	.	.	.	.	.	.	.	.	D	V	L	L	L	N	T	C	S	I	R	E	K	A	Q	E	K	V	F	H	Q	L	G	R	W	K	L	L
Query Conservation																																					.	.							.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																			.						.	.							.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation									.	.	.	.																			.																																					.	.	.	.	.	.	.
Template Sequence		L	R	P	R	V	L	L	.	.	.	.	V	E	D	S	T	S	L	A	I	L	Y	K	Q	Y	V	K	D	E	.	P	Y	D	I	F	H	V	E	T	G	R	D	A	I	Q	F	I	E	R	S	K	P	Q	L	I	I	L	D	L	K	L	P	D	M	S	G	.	.	.	.	.	.	.	E	D	V	L	D	W	I
Template Known Secondary structure									.	.	.	.			S		T	T									T	T	T	S	.	S	S						S	S														S						S	B		S	S	S	B		.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.																			.																																					.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	K	N	P	D	L	I	I	G	V	G	G	C	V	A	S	Q	E	G	E	H	I	R	Q	R	A	H	Y	V	D	I	I	F	G	P	Q	T	L	H	R	L	P	E	M	I	N	S	V	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	N	D	I	P	T	S	V	I	I	A	T	A	H	G	S	V	D	L	A	V	N	L	I	Q	K	G	A	E	D	F	L	E	K	P	I	N	A	D	R	L	K	T	S	V	A	L	H	L	K
Template Known Secondary structure				T	T										S	S												T	T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions