Job Description P0AEI1 Confidence 68.85% Date Thu Jan 5 11:23:24 GMT 2012 Rank 75 Aligned Residues 141 % Identity 11% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A	Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	I	D	G	I	D	R	I	R	F	T	T	S	H	P	I	E	F	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																											.													.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.																											.
Template Sequence		G	N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	.	.	.	.	.	.	.	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	N	V	P	.	L	S	L	D	I	Q	N	V	D	L	T	E	R	A	L	R	A	Y	P	G	R	S
Template Known Secondary structure		T															T	T		S						.	.	.	.	.	.	.		S	S	G	G	G	S																T		S		.																			S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.																											.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360								.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
														246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	D	I	I	E	V	Y	R	D	T	P	E	L	V	S	F	L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	.	.	Q	I	S	S	D	F	I	V	G	F	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.	.	.	.															.	.			.	.											.
Template Conservation																									.	.																				.	.	.	.	.															.	.
Template Sequence		L	F	N	S	A	K	V	D	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	.	.	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	E	E	R	.	.	.	.	.	K	E	Y	F	E	K	A	L	K	I	L	E	R	H	.	.	D	F	S	D	R	V	I	F	D	P	G	V	L	P	L
Template Known Secondary structure								S																	.	.							S		S	S	S				S					.	.	.	.	.														T	.	.	T		T	T	S										G
Template Predicted Secondary structure																									.	.																				.	.	.	.	.															.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450						.	.	.	.	.	.	.	.	.	460	.	.	.	.			.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
			311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	G	E	T	T	E	D	F	E	K	T	M	K	L	I	A	D	V	N	F	D	M	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	A	E	G	K	P	V	E	V	L	K	T	I	E	F	I	S	S	K	G	F	N	T	T
Template Known Secondary structure		G	G	T																T	T			B
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions