 |
Job Description | P0AEI1 | Confidence | 36.54% | Date | Thu Jan 5 11:23:24 GMT 2012 |
Rank | 157 | Aligned Residues | 104 |
% Identity | 7% | Template | c3bg3B_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial; |
PDBTitle: crystal structure of human pyruvate carboxylase (missing2 the biotin carboxylase domain at the n-terminus)
|
Resolution | 2.80 Å |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | C | N | K | Y | C | T | Y | C | V | V | P | Y | T | R | G | E | E | V | S | R | . |
P | S | D | D | I | L | F | E | I | A | Q | L | A | A | Q | G | V | R | E | V | N | L | L | G | Q | N | V | N | A | W | R | G | E | N | Y | D | G | T | T | G | S | F | A | D | L | L | R | L | V | A | A | I | D | G | I | D | R | I |
Query Conservation |   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|
| . |   |   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|   |
| . | . | . |
|
|
|
|
| . | . | . | . | . | . |
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|
|
|
|
|
Template Sequence |   |
G | G | V | V | E | A | A | I | S | Y | T | G | D | V | A | D | P | S | R | T | K | Y | S | L | Q | Y | Y | M | G | L | A | E | E | L | V | R | A | G | T | H | I | L | C | I | . |
. |
. |
D | M | A | G | L | . |
. |
. |
. |
. |
. |
L | K | P | T | A | C | T | M | L | V | S | S | L | R | D | R | F | P | D | L | P | L |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |
|
|
|
| S |
| T | T |
| T | T |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| . | . | . |
| T | T |
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
697 | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | |
|
|
. | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . |
  |
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | T | T | S | H | P | I | E | F | T | D | D | I | I | E | V | Y | R | D | T | P | E | L | V | S | F | L | H | L | P | V | Q | S | G | S |
Query Conservation |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|
| . | . |
|
|   |
|
|   |
|
|   |   |
|
|
Template Sequence |   |
H | I | H | T | H | D | T | S | G | A | G | V | A | A | M | L | A | C | A | Q | A | G | . |
. |
A | D | V | V | D | V | A | A | D | S | M | S |
Template Known Secondary structure |   |
 |  |
|
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T | . | . |
| S |  |  |  |  | B |
| G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
769 | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | |
|
. | . | . | . | . | . | . | . | . | 800 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|