Job Description P0AEI1 Confidence 100.00% Date Thu Jan 5 11:23:24 GMT 2012 Rank 1 Aligned Residues 264 % Identity 32% Template c2qgqF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 Resolution 2.00 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	Y	C	V	V	P	Y	T	R	G	E	E	V	S	R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A	Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	I	D	G	I	D	R	I	R	F	T	T	S	H
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		R	P	Y	A	Y	V	K	I	S	D	G	S	L	R	S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	E	G	K	K	E	I	I	L	V	A	Q	D	T	T	S	Y	G	I	D	L	.	.	Y	R	K	Q	A	L	P	D	L	L	R	R	L	N	S	L	N	G	E	F	W	I	R	V	X	Y	L	H
Template Known Secondary structure			S							B						B																T	T									S		G	G	G	T	T	T	T	T	.	.	T	S	S												T	S	S	S	S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	E	F	T	D	D	I	I	E	V	Y	R	D	T	P	E	L	V	S	F	L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	F	I	V	G	F	P	G	E	T	T	E	D	F	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	H	L	T	E	E	I	I	S	A	X	L	E	L	D	K	V	V	K	Y	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	E	E	L	K	K	X	L	S	S	I	R	E	R	F	P	D	A	V	L	R	T	S	I	I	V	G	F	P	G	E	T	E	E	D	F	E	E
Template Known Secondary structure		G	G	G													T	T	B		S							B		S									T			S																	T	T										S		T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	K	L	I	A	D	V	N	F	D	M	S	Y	S	F	I	F	S	A	R	P	G	T	P	A	A	D	M	V	D	D	V	P	E	E	E	K	K	Q	R	L	Y	I	L	Q	E	R	I	N	Q	Q	A	M	A	W	S	R	R	M	L	G	T	T	Q	R	I	L	V	E	G	T	S	R	K	S	I	M	E	L
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		L	K	Q	F	V	E	E	I	Q	F	D	K	L	G	A	F	V	Y	S	D	K	V	D	P	E	.	.	.	.	.	.	.	.	.	.	.	X	A	K	R	R	Q	E	E	L	L	L	L	Q	A	E	I	S	N	S	R	L	D	R	F	V	G	K	K	L	K	F	L	V	E	G	K	E	G	.	.	.	K	F	L
Template Known Secondary structure												S															.	.	.	.	.	.	.	.	.	.	.																							T	T	B	T												T	.	.	.	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.												.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.
		401	.	.	.	.	.	.	.	.					410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		S	G	R	T	E	N	N	R	V	.	.	.	.	V	N	F	E	G	T	P	D	M	I	G	K	F	V	D	V	E	I	T	D	V	Y	P	N	S	L	R	G	K	V	V
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		V	G	R	T	W	T	E	A	P	E	V	D	G	V	V	F	V	R	G	K	G	K	I	G	D	F	L	E	V	V	I	K	E	H	D	E	Y	D	X	W	G	S	V	I
Template Known Secondary structure						T	T			T	T	T	S							S				T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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