Job Description P0AEI1 Confidence 94.75% Date Thu Jan 5 11:23:24 GMT 2012 Rank 20 Aligned Residues 148 % Identity 11% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A	Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	I	D	G	I	D	R	I	R	F	T	T	S	H	P	I	E	F	T	D	D	I	I	E	V	Y	R	D
Query Conservation
Alig confidence																								.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation																								.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		I	V	S	T	P	V	K	I	K	L	I	D	M	L	S	E	A	G	L	S	V	I	.	.	.	.	.	E	T	T	S	F	V	S	P	K	W	V	P	Q	M	G	D	H	T	E	V	L	K	G	I	Q	K	F	P	G	I	N	Y	P	V	L	T	.	.	.	.	.	.	P	N	L	K	G	F	E	A	A	V	A
Template Known Secondary structure																		T	T		S			.	.	.	.	.								T	T	T		G	G	G	T	T								S				T	T		B						.	.	.	.	.	.		S
Template Predicted Secondary structure																								.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																																.	.	.
Query SS confidence																														.	.																																.	.	.
Query Sequence		T	P	E	L	V	S	F	L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	.	.	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	F	I	V	G	F	P	G	E	.	.	.	T	T	E	D	F	E	K	T	M	K	L	I	A	D	V	N
Query Conservation																														.	.																																.	.	.
Alig confidence				.	.																									.	.																																.	.	.
Template Conservation				.	.
Template Sequence		A	G	.	.	A	K	E	V	V	I	F	G	A	A	S	E	L	F	T	K	K	N	I	N	C	S	I	E	E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	N	I	S	V	R	G	Y	V	S	C	A	L	G	C	P	Y	E	G	K	I	S	P	A	K	V	A	E	V	T	K	K	F	Y	S	M	G
Template Known Secondary structure		T	T	.	.		S								S									T	S	S		T	T	T															T	T									S	T	T		B	T	T	T	B	S																T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		119	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	M	S	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	Y	E	I	S	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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