Job Description P0AEI1 Confidence 65.34% Date Thu Jan 5 11:23:24 GMT 2012 Rank 81 Aligned Residues 146 % Identity 10% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A	Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	I	D	G	I	D	R	I	R	F	T	T	S	H	P	I	E	F	T	D	D	I	I	E	V	Y	R	D
Query Conservation
Alig confidence																																								.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.																					.	.	.	.	.	.
Template Sequence		W	I	A	T	E	D	K	I	T	W	I	N	Q	L	S	R	T	G	L	S	Y	I	E	I	T	S	F	V	H	P	K	W	I	P	A	L	R	D	.	.	.	.	.	A	I	D	V	A	K	G	I	D	R	E	K	G	V	T	Y	A	A	L	V	.	.	.	.	.	.	P	N	Q	R	G	L	E	N	A	L	E
Template Known Secondary structure																	T	T	T		S								S		T	T	T		G	G	G	T	T	.	.	.	.	.								S				T	T								.	.	.	.	.	.		S
Template Predicted Secondary structure																																								.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.																												.	.	.	.	.
Query SS confidence																															.	.																												.	.	.	.	.
Query Sequence		T	P	E	L	V	S	F	L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	A	.	.	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	F	I	V	G	F	.	.	.	.	.	P	G	E	T	T	E	D	F	E	K	T	M	K	L	I	A	D
Query Conservation																															.	.																												.	.	.	.	.
Alig confidence				.	.																										.	.														.	.													.	.	.	.	.
Template Conservation				.	.																																									.	.
Template Sequence		G	G	.	.	I	N	E	A	C	V	F	X	S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	.	.	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S	E	A	L	F	E
Template Known Secondary structure			T	.	.		S								S	S						T	T	T		S																			T	.	.	T										T	T		B	T	T	T	B
Template Predicted Secondary structure				.	.																																									.	.
Template SS confidence
		93	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	F	D	M	S	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	I	S	E	L	S	L
Template Known Secondary structure			T		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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