Job Description P0AEI1 Confidence 21.19% Date Thu Jan 5 11:23:24 GMT 2012 Rank 257 Aligned Residues 135 % Identity 7% Template c1mgpA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:hypothetical protein tm841; PDBTitle: hypothetical protein tm841 from thermotoga maritima reveals2 fatty acid binding function Resolution 2.00 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	S	D	D	I	L	F	E	I	A	Q	L	A	A	Q	G	V	R	E	V	N	L	L	G	Q	N	V	N	A	W	R	G	E	N	Y	D	G	T	T	G	S	F	A	D	L	L	R	L	V	A	A	I	D	G	I	D	R	I	R	F	T	T	S	H	P	I	E	F	T	D	D	I	I	E	V	Y	R	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Sequence		S	G	A	I	P	L	P	A	R	V	A	R	E	X	L	E	N	G	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	E	V	L	K	K	L	D	E	R	X	K	N	K	D	F	K	A	I	.	.	.	.	.	.	F	Y	V	S	N	F	D	Y	L	V	K
Template Known Secondary structure		G	G	G	T													T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T						.	.	.	.	.	.				S		T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		T	P	E	L	V	S	F	L	H	L	P	V	Q	S	G	S	D	R	I	L	N	L	M	G	R	T	H	T	A	L	E	Y	K	A	I	I	R	K	L	R	A	A	R	P	D	I	Q	I	S	S	D	F	I	V	G	F	P	G	E	T	T	E	D	F	E	K	T	M	K	L	I	.	A	D	V	N	F	D	M	S
Query Conservation																																																																									.
Alig confidence											.																																															.															.
Template Conservation											.																																															.
Template Sequence		G	G	R	V	L	L	K	I	R	.	V	C	L	H	I	E	N	G	E	L	I	P	Y	R	K	V	R	G	D	K	K	A	I	E	A	L	I	E	K	L	R	E	D	T	P	E	G	S	K	L	R	V	I	G	V	H	.	A	D	N	E	A	G	V	V	E	L	L	N	T	L	R	K	S	Y	E	V	V	D	E
Template Known Secondary structure			T				T	T			.							T	T										S														T	T	S		T	T										.	S	S													T	T	T	S
Template Predicted Secondary structure											.																																															.
Template SS confidence
		198	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		334	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	F	I	F	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	S	P	X	G	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions