Return to main results Retrieve Phyre Job Id

Job DescriptionP75919
Confidence98.32%DateThu Jan 5 12:16:03 GMT 2012
Rank11Aligned Residues149
% Identity17%Templated2o8ra4
SCOP infoPhospholipase D/nuclease Phospholipase D/nuclease Polyphosphate kinase C-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300.........310.........320.........330.........340....
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  SLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTNSLAANDVAVVHAGYARWRKKLLRYGVELYE
Query Conservation    
   
   
  
   
 
 
 

 
      

  
  


 
 

  
    
   
          

  

 
 
Alig confidence 

























.























............................
Template Conservation   


 

  
  
  
 
  




 .
  

  

 





 
 




............................
Template Sequence  NLIEREIENVKRGKRGYXLLKXNGLQ. DKNVITQLYRASEAGVEIDLIVRG. . . . . . . . . . . . . . . . . . . . . . . . . . . . I
Template Known Secondary structure  TT


S
B
.
TT
SS............................
Template Predicted Secondary structure 








.



............................
Template SS confidence 















































































   520.........530.........540..... ....550.........560......... 570
 
   345....350.........360........ .370..... ....380.........390.........400.........410.........420
Predicted Secondary structure 




















....













Query SS confidence 























.






. . .












































Query Sequence  LKPTREQSSTLHDRGITGNSGASL. HAKTFSI. . . DGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQY
Query Conservation                         
.


  

...

    


 
 
 

   
 
  
 
 
  

  
         
Alig confidence 








.













.






...












































Template Conservation 


 


 
.



 
 












 
 
 
   






 
 


 




  

 
  

  
  

   
 
Template Sequence  CCLVPDXPQ. SRNIRVTRLVDXYLEHSRIWCFHNGGKEEVFISSADWXKRNLYNRIETACPVLDPTLRREIIDILEIQLR
Template Known Secondary structure  B
S

SSGG.GTT

SSS





GGGS
S

B
TS



S
Template Predicted Secondary structure 





.



















Template SS confidence 















































































   571........ 580.........590.........600.........610.........620.........630.........640.........
 
   421........430.........440...
Predicted Secondary structure 











Query SS confidence 






















Query Sequence  DAAWQLRLDRWGRINWVDRHAKK
Query Conservation                 
       
Alig confidence 






















Template Conservation 

 

  
  

 
         
Template Sequence  DNIKACRIDSSLNNIYKHNSDEK
Template Known Secondary structure 

SS

TT




TTS
Template Predicted Secondary structure 















Template SS confidence 






















   650.........660.........670..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions