 |
Job Description | P75919 | Confidence | 7.27% | Date | Thu Jan 5 12:16:03 GMT 2012 |
Rank | 80 | Aligned Residues | 70 |
% Identity | 20% | Template | d1w6ka2 |
SCOP info | alpha/alpha toroid
| Terpenoid cyclases/Protein prenyltransferases
| Terpene synthases
|
Resolution | 2.1 |
|
 |
  |   |
404 | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | |
420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
S | E | T | L | A | Q | L | I | D | K | R | F | I | Q | S | Q | . |
Y | D | A | A | W | Q | L | R | L | D | R | W | G | R | I | N | W | V | D | R | H | A | K | K | E | I | I | L | K | K | E | P | A | T | S | F | W | K | R | V | M | V | R | L | A | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
Template Sequence |   |
P | A | G | Y | R | E | E | I | V | R | Y | L | R | S | V | Q | L | P | D | G | G | W | G | L | H | I | E | D | K | S | T | V | F | G | T | A | L | N | Y | V | S | L | R | I | L | G | V | G | P | D | D | P | D | L | V | R | A | R | N | I | L | H | K | K | G | G | A | V | A | I | P | S | W | G | K | F | W | L | A | V |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | S |
| B |
| S | B | T | T | S |
|
| B |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
467 | . | . | 470 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | P | V | E | W | L | L |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|
Template Sequence |   |
L | N | V | Y | S | W | E | G | L | N | T | L | F | P | E | M | W | L |
Template Known Secondary structure |   |
T | T | S | S |
| G | G | G | S |
|
|
|
| G | G | G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|