Job Description P75919 Confidence 100.00% Date Thu Jan 5 12:16:03 GMT 2012 Rank 3 Aligned Residues 196 % Identity 15% Template d1v0wa1 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Phospholipase D Resolution 1.35

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																						.	.																.	.	.	.
Query SS confidence																																							.																						.	.																.	.	.	.
Query Sequence		H	P	G	Q	C	G	L	F	P	L	E	K	S	L	D	A	F	A	A	R	Y	R	L	A	E	M	A	E	H	T	L	D	V	Q	Y	Y	I	.	W	Q	D	D	M	S	G	R	L	L	F	S	A	L	L	A	A	A	K	R	G	.	.	V	R	V	R	L	L	L	D	D	N	N	T	P	G	L	.	.	.	.
Query Conservation																																							.																						.	.																.	.	.	.
Alig confidence																																							.																						.	.																.	.	.	.
Template Conservation
Template Sequence		C	W	G	D	D	K	C	A	D	R	V	G	T	K	R	L	L	A	K	M	T	E	N	I	G	N	A	T	R	T	V	D	I	S	T	L	A	P	F	P	N	G	A	F	Q	D	A	I	V	A	G	L	K	E	S	A	A	K	G	N	K	L	K	V	R	I	L	V	G	A	A	P	H	M	N	V	I	P	S	K
Template Known Secondary structure			T	T		T	T																				T		S	S								S	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
			88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	D	I	L	R	L	L	D	S	H	P	R	I	E	V	R	L	F	N	P	F	S	F	R	L	L	R	P	L	G	Y	I	T	D	F	S	R	L	N	R	R	M	H	N	K	S	F	T	V	D	G	V	V	T	L	V	G	G	R	N	I	G	D	A	Y	F	G	A	G	E	E	P	L	F	S	D	L	D	V
Query Conservation		.
Alig confidence		.																					.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		Y	R	D	E	L	T	A	K	L	G	K	A	A	E	N	I	T	L	N	V	A	.	.	.	.	.	.	.	.	.	.	S	M	T	T	S	K	T	A	F	S	W	N	H	S	K	I	L	V	V	D	G	Q	S	A	L	T	G	G	I	N	S	W	K	D	D	Y	.	L	D	T	T	H	P	V	S	D	V	D	L
Template Known Secondary structure											G	G	G	G	G	G							.	.	.	.	.	.	.	.	.	.				S	B	T	T	T	T	B										T	T	T						S									.	T	S	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	I	G	P	V	V	E	D	V	A	D	D	F	A	R	Y	W	Y	C	K	S	V	S	P	L	Q	Q	V	L	D	V	P	E	G	E	M	A	D	R	I	E	L	P	A	S	W	H	N	D	A	M	T	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	T	G	P	A	A	G	S	A	G	R	Y	L	D	T	L	W	T	W	T	C	Q	N	K	S	N	I	A	S	V	W	F	A	A	S	G	N	A	G	C	M	P	T	M	H	K	D	T	N	P	K	A	S	P
Template Known Secondary structure					S																				T	T	T	S	T	T	T						S	T	T					T	T						S		S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions