Return to main results Retrieve Phyre Job Id

Job DescriptionP75919
Confidence95.86%DateThu Jan 5 12:16:03 GMT 2012
Rank15Aligned Residues45
% Identity20%Templated1q32a2
SCOP infoPhospholipase D/nuclease Phospholipase D/nuclease Tyrosyl-DNA phosphodiesterase TDP1
Resolution2.03

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360........ .370.... ... ..380.........390.... .....400..
Predicted Secondary structure 








...

.......






......



Query SS confidence 










.





. .


. . . . . . .
















. . . . . .







Query Sequence  RGITGNSGASL. HAKTFS. . IDG. . . . . . . KTVFIGSFNFDPRSTLL. . . . . . NTEMGFVI
Query Conservation            
.


  
..


.......    


 
 
 

   ......
 
  
 
Alig confidence 










.





..


.......
















......







Template Conservation       

   
 




 
            
 












     
 






 
Template Sequence  AMVTRRRGTTPAHSKFYMHCATNSQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLY
Template Known Secondary structure  TTS
TTTTT







TTSSS

BS

SSS

SS


Template Predicted Secondary structure 


































Template SS confidence 




























































   420.........430.........440.........450.........460.........470.........480
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions