Job Description P75919 Confidence 99.77% Date Thu Jan 5 12:16:03 GMT 2012 Rank 8 Aligned Residues 297 % Identity 18% Template c2o8rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis Resolution 2.70 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		F	P	L	E	K	S	L	D	A	F	A	A	R	Y	R	L	A	E	M	A	E	.	.	.	.	.	H	T	L	D	V	Q	Y	Y	I	W	Q	D	D	M	S	G	R	L	L	F	S	A	L	L	A	A	A	K	R	G	V	R	V	R	L	L	L	D	D	N	N	T	P	G	L	D	D	I	L	R	L	L	D	S
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.														.	.	.																												.	.
Template Conservation																																									.	.	.																												.	.
Template Sequence		Y	L	I	H	V	P	Y	Y	T	Y	D	Y	V	V	R	L	L	X	E	A	A	I	S	P	D	V	S	E	I	R	L	T	Q	Y	R	V	A	E	N	.	.	.	S	S	I	I	S	A	L	E	A	A	A	Q	S	G	K	K	V	S	V	F	V	E	L	K	A	R	F	.	.	N	L	R	L	S	E	R	X	R
Template Known Secondary structure							T	T	B		S												T		T	T									S				S		.	.	.													T	T											S			.	.
Template Predicted Secondary structure																																									.	.	.																												.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.			.	.	.	.
Query SS confidence																																										.	.	.	.	.			.	.	.	.
Query Sequence		H	P	R	I	E	V	R	L	F	N	P	F	S	F	R	L	L	R	P	L	G	Y	I	T	D	F	S	R	L	N	R	R	M	H	N	K	S	F	T	V	.	.	.	.	.	D	G	.	.	.	.	V	V	T	L	V	G	G	R	N	I	G	D	A	Y	F	G	A	G	E	E	P	L	F	S	D	L	D	V	M
Query Conservation																																										.	.	.	.	.			.	.	.	.
Alig confidence								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.			.	.	.	.										.	.	.	.	.
Template Conservation								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		R	S	G	I	R	I	.	V	Y	S	X	P	G	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	A	K	T	A	L	I	L	Y	H	T	P	A	G	E	R	P	Q	G	I	A	L	L	S	T	G	N	.	.	.	.	.	F	N	E	T	T	A	R	I	Y	S	D	T	T	L	X
Template Known Secondary structure				T				.					T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B													S	S	S										S	S		.	.	.	.	.	S	S				S	S
Template Predicted Secondary structure								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		422	.	.	.	.	.		.	.	430	.	.	.	.	.																		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.						.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		168	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	I	G	P	.	V	V	E	D	V	A	D	D	F	A	R	Y	W	Y	C	K	S	V	S	P	L	Q	Q	V	L	D	V	P	E	G	E	M	A	D	R	I	E	L	P	A	S	W	H	N	D	A	M	T	H	R	Y	L	R	K	M	E	S	S	P	F	I	N	H	L	V	D	G	T	L	P	L	I	W	A	K
Query Conservation						.
Alig confidence						.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	N	T	D	I	V	H	D	V	Y	R	L	F	R	I	L	D	G	D	P	E	P	A	R	F	S	R	L	L	V	A	R	Y	N	X	G	E	A	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T	T					S			S	S				T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	L	L	S	D	D	P	A	K	G	E	G	K	A	K	R	H	S	L	L	P	Q	R	L	F	D	I	M	G	S	P	S	E	R	I	D	I	I	S	S	Y	F	V	P	T	R	A	G	V	A	Q	L	L	R	M	V	R	K	G	V	K	I	A	I	L	T	N	S	L	A	A	N	D	V	A	V	V	H	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	I	E	R	E	I	E	N	V	K	R	G	K	R	G	Y	X	L	L	K	X	N	G	L	Q	.	D	K	N	V	I	T	Q	L	Y	R	A	S	E	A	G	V	E	I	D	L	I	V	R	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T										S		B		.														T	T								S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																												.								.	.	.
Query SS confidence																																												.								.	.	.
Query Sequence		G	Y	A	R	W	R	K	K	L	L	R	Y	G	V	E	L	Y	E	L	K	P	T	R	E	Q	S	S	T	L	H	D	R	G	I	T	G	N	S	G	A	S	L	.	H	A	K	T	F	S	I	.	.	.	D	G	K	T	V	F	I	G	S	F	N	F	D	P	R	S	T	L	L	N	T	E	M	G	F	V	I
Query Conservation																																												.								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.															.								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	C	C	L	V	P	D	X	P	Q	.	S	R	N	I	R	V	T	R	L	V	D	X	Y	L	E	H	S	R	I	W	C	F	H	N	G	G	K	E	E	V	F	I	S	S	A	D	W	X	K	R	N	L	Y	N	R	I	E	T	A	C	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		S			S	S	G	G	.	G	T	T								S	S	S											G	G	G	S							S			B							T	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
																			570	.	.	.	.	.	.	.	.	.		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	T	L	A	Q	L	I	D	K	R	F	I	Q	S	Q	Y	D	A	A	W	Q	L	R	L	D	R	W	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	P	T	L	R	R	E	I	I	D	I	L	E	I	Q	L	R	D	N	I	K	A	C	R	I	D	S	S	L	N
Template Known Secondary structure			S																			S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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