Job Description P75919 Confidence 96.22% Date Thu Jan 5 12:16:03 GMT 2012 Rank 14 Aligned Residues 46 % Identity 28% Template c1nopB_ PDB info PDB header:hydrolase/dna Chain: B: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure of human tyrosyl-dna phosphodiesterase2 (tdp1) in complex with vanadate, dna and a human3 topoisomerase i-derived peptide Resolution 2.30 Å

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		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.							.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.												.	.	.	.	.	400	.	.
Predicted Secondary structure																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	G	I	T	G	N	S	G	A	S	L	H	A	K	T	F	S	I	D	G	K	.	.	.	.	.	.	T	V	F	I	G	S	F	N	F	D	P	R	S	T	L	L	.	.	.	.	.	.	.	.	.	.	.	N	T	E	M	G	F	V	I
Query Conservation																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	E	T	S	G	R	S	N	A	M	P	H	I	K	T	Y	M	R	P	S	P	D	F	S	K	I	A	W	F	L	V	T	S	A	N	L	S	K	A	A	W	G	A	L	E	K	N	G	T	Q	L	M	I	R	S	Y	E	L	G	V	L	F
Template Known Secondary structure				G	G	G	T		T	T	S		B										T	T	S	S									S			B	S									T	T	T	T						S	B
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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