Return to main results Retrieve Phyre Job Id

Job DescriptionP77243
Confidence100.00%DateThu Jan 5 12:26:44 GMT 2012
Rank1Aligned Residues473
% Identity97%Templated1szqa_
SCOP info2-methylcitrate dehydratase PrpD 2-methylcitrate dehydratase PrpD 2-methylcitrate dehydratase PrpD
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  EFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDTLGCGLEALEYPACKKLLGPIVPGTVVPNGVRVPGTQFQLDPVQAAF
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Template Sequence  EFDREIVDIVDYVXNYEISSKVAYDTAHYCLLDTLGCGLEALEYPACKKLLGPIVPGTVVPNGVRVPGTQFQLDPVQAAF
Template Known Secondary structure 







TT
TT
S
SSTT


TT

TTS


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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  NIGAMIRWLDFNDTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIALENSFNRVGLD
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Template Sequence  NIGAXIRWLDFNDTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTXKQVLTAXIKAHEIQGCIALENSFNRVGLD
Template Known Secondary structure  TS
S
BB
SSS
B
GGGGTT



BTTT

SGGGTB
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  HVLLVKVASTAVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAKTGEMGYPSAL
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Template Sequence  HVLLVKVASTAVVAEXLGLTREEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALXAKTGEXGYPSAL
Template Known Secondary structure  TTT

TS


B
GGGSTTS

TTT



TTTT
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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   251........260.........270.........280.........290.........300.........310.........320.........330
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Query Sequence  TAPVWGFYDVSFKGESFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACIR
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Template Conservation       
                

          
 

 
   
 



   
       

   

  
 
     
  
Template Sequence  TAPVWGFYDVSFKGESFRFQRPYGSYVXENVLFKISFPAEFHSQTAVEAAXTLYEQXQAAGKTAADIEKVTIRTHEACIR
Template Known Secondary structure  T
TTTSSTT




SS
SSS
B


SSS

TTTTT

GGG
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   251........260.........270.........280.........290.........300.........310.........320.........330
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  IIDKKGPLNNPADRDHCIQYMVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLE
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Template Sequence  IIDKKGPLNNPADRDHCIQYXVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLE
Template Known Secondary structure 


S


STT
S


GGGGST
T

TTT



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   331........340.........350.........360.........370.........380.........390.........400.........410
 
   411........420.........430.........440.........450.........460.........470.........480...
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Query Sequence  FTDGTRFEEVVVEYPIGHARRRQDGIPKLVDKFKINLARQFPTRQQQRILEVSLDRARLEQMPVNEYLDLYVI
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Template Conservation 
 

       
  
 
     
     
  

       
       
   
   
 
 
    

  
   
Template Sequence  FTDGTRFEEVVVEYPIGHARRRQDGIPKLVDKFKINLARQFPTRQQQRILEVSLDRARLEQXPVNEYLDLYVI
Template Known Secondary structure  TTS
B



S
TTSGGGS

SBTTT

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   411........420.........430.........440.........450.........460.........470.........480...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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