 |
Job Description | P30126 | Confidence | 28.22% | Date | Thu Jan 5 11:45:48 GMT 2012 |
Rank | 29 | Aligned Residues | 50 |
% Identity | 14% | Template | c3t07D_ |
PDB info |
PDB header:transferase/transferase inhibitor | Chain: D: PDB Molecule:pyruvate kinase; |
PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid
|
Resolution | 3.30 Å |
|
 |
  |   |
98 | . | 100 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | K | V | V | I | A | P | . |
. |
. |
. |
. |
S | F | A | D | I | F | Y | G | N | S | F | N | N | Q | L | L | P | V | K | L | S | D | A | E | V | D | E | L | F | A | L | V | K | A | N | P | G | I | H | F | D | V | D | L | E | A | Q | E | V | K | A | G |
Query Conservation |   |
|   |
|
|
|
|   | . | . | . | . | . |
|
|
|   |
|
|   |   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|   |   |
|   |
|
|   |   |
|
|
|   |
|   | . | . | . |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
| . | . | . | . | . | . |   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|
|   |
|
Template Sequence |   |
A | L | G | L | I | T | E | E | N | G | I | T | S | P | S | A | I | V | G | L | E | . |
. |
. |
K | G | I | P | T | V | V | G | V | E | K | A | V | K | N | I | . |
. |
. |
. |
. |
. |
S | N | N | V | L | V | T | I | D | A | A | Q | G | K | I | F | E | G |
Template Known Secondary structure |   |
S | S |  |  |  |  | S | S |
|
| T | T | S |  |  |  |  |  |  |  |  | . | . | . |  | T |
|
|  |  |  |
|
| T | T |  |  |  |  | S | . | . | . | . | . | . |
| S | S |
|  |  |  |  |  | T | T | T | T |  |  |  | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | |
|
|
. | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|