Job Description P30126 Confidence 100.00% Date Thu Jan 5 11:45:48 GMT 2012 Rank 9 Aligned Residues 180 % Identity 23% Template c2b3yB_ PDB info PDB header:lyase Chain: B: PDB Molecule:iron-responsive element binding protein 1; PDBTitle: structure of a monoclinic crystal form of human cytosolic aconitase2 (irp1) Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.											.	.	30	.																.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																		.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence											.																		.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		A	E	K	F	I	K	H	T	G	.	L	V	V	P	L	D	A	A	N	V	D	T	D	A	I	I	P	.	.	.	.	.	.	.	.	.	.	K	Q	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	V	T	R	T	G	F	G	A	H	L	F	N	D	W	R	.	.	.	.	.	.	.
Query Conservation											.																		.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence											.																		.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	P	P	K	S	I	V	D	A	Y	V	L	L	N	L	G	D	S	V	T	T	D	H	I	S	P	A	G	N	I	A	R	N	S	P	A	A	R	Y	L	T	N	R	G	L	T	P	R	E	F	N	S	Y	G	S	R	R	G	N	D	A	V	M	A	R	G	T	F	A	N	I	R	L	L	N	R	F	L	N
Template Known Secondary structure																			S			B					S			S				S	S	S									T	T			G	G	G				T	G	G	G	T	T								T	T	T			T	T				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
									49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	F	L	D	E	K	G	Q	Q	P	N	P	D	F	V	L	N	F	P	Q	Y	Q	G	A	S	I	L	L	A	R	E	N	F	G	C	G	S	S	R	E	H	A	P	W	A	L	T	D	Y	G	F	K	V	V	I	A	P	S	F	A	D	I	F	Y	G	N	S	F	N	N	Q	L	L	P
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	A	P	Q	T	I	H	L	P	S	G	E	I	L	D	V	F	D	A	A	E	R	Y	Q	Q	A	G	L	P	L	I	V	L	A	G	K	E	Y	G	A	G	S	S	R	D	W	A	A	K	G	P	F	L	L	G	I	K	A	V	L	A	E	S	Y	E	R	I	H	R	S	N	L	V	G	M	G	V	I	P
Template Known Secondary structure					S					T	T	T	T															T	T									S	S	B	T	B	S				T									T	T							S		B											T	T
Template Predicted Secondary structure
Template SS confidence
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
		122	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure						.																											.	.	.	.	.	.	.	.														.	.	.
Query SS confidence						.																											.	.	.	.	.	.	.	.														.	.	.
Query Sequence		V	K	L	S	.	D	A	E	V	D	E	L	F	A	L	V	K	A	N	P	G	I	H	F	D	V	D	L	E	A	Q	.	.	.	.	.	.	.	.	E	V	K	A	G	E	K	T	Y	R	F	T	I	.	.	.	D	A	F	R	R	H	C	M	M	N	G	L	D	S	I	G	L	T	L	Q	H	D
Query Conservation						.																											.	.	.	.	.	.	.	.														.	.	.
Alig confidence						.								.	.	.	.																.	.	.	.	.	.	.	.														.	.	.													.
Template Conservation														.	.	.	.																																																				.
Template Sequence		L	E	Y	L	P	G	E	N	A	D	A	L	.	.	.	.	G	L	T	G	Q	E	R	Y	T	I	I	I	P	E	N	L	K	P	Q	M	K	V	Q	V	K	L	D	T	G	K	T	F	Q	A	V	M	R	F	D	T	D	V	E	L	T	Y	F	L	N	G	G	.	I	L	N	Y	M	I	R	K	M
Template Known Secondary structure						T	T							.	.	.	.	T			S		S								S	S			T	T								T	T	S											S										T	S	.
Template Predicted Secondary structure														.	.	.	.																																																				.
Template SS confidence
		816	.	.	.	820	.	.	.	.	.	.	.					.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.		.	880	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions