Job Description P33228 Confidence 3.64% Date Thu Jan 5 11:51:27 GMT 2012 Rank 25 Aligned Residues 51 % Identity 14% Template d1d1da2 SCOP info Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Resolution UNK

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	M	K	E	Q	L	A	A	A	L	P	R	H	M	T	A	E	R	M	I	R	I	A	T	T	E	I	R	K	V	P	A	L	G	N	C	D	T	M	S	F	V	S	A	I	V	Q	C	S	Q	L
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		P	K	L	I	T	R	L	A	D	T	V	R	T	K	G	L	R	S	P	I	T	M	A	E	V	E	A	L	M	S	S	P	.	L	L	P	H	D	V	T	N	L	M	R	V	I	L	G	P	A	P	Y
Template Known Secondary structure																	T	T	S	S											T	S		.														S
Template Predicted Secondary structure																																		.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions