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Job Description | P33228 | Confidence | 2.66% | Date | Thu Jan 5 11:51:27 GMT 2012 |
Rank | 46 | Aligned Residues | 51 |
% Identity | 12% | Template | c2kgfA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:capsid protein p27; |
PDBTitle: n-terminal domain of capsid protein from the mason-pfizer2 monkey virus
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Resolution | UNK |
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36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | S | M | K | E | Q | L | A | A | A | L | P | R | H | M | T | A | E | R | M | I | R | I | A | T | T | E | I | R | K | V | P | A | L | G | N | C | D | T | M | S | F | V | S | A | I | V | Q | C | S | Q | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | A | V | I | K | E | L | K | T | A | A | S | Q | Y | G | A | T | A | P | Y | T | L | A | I | V | E | S | V | A | D | N | W | . |
L | T | P | T | D | W | N | T | L | V | R | A | V | L | S | G | G | D | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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