Job Description P0A7H6 Confidence 95.41% Date Thu Jan 5 11:05:41 GMT 2012 Rank 7 Aligned Residues 107 % Identity 23% Template d1gkub3 SCOP info Prokaryotic type I DNA topoisomerase Prokaryotic type I DNA topoisomerase Prokaryotic type I DNA topoisomerase Resolution 2.7

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	I	C	V	V	E	S	P	A	D	I	Y	A	I	E	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	F	S	G	R	Y	F	V	L	.	.	.	M	G	H	L	S	P	L	D	G	I	G	P	D	D	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.									.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.
Template Sequence		P	A	L	F	I	V	E	S	P	T	K	A	R	Q	I	S	R	F	F	G	K	P	S	V	K	V	L	D	G	A	V	V	Y	E	I	P	M	Q	K	Y	V	L	M	V	T	A	S	I	G	H	V	V	D	L	I	.	.	T	N	R	G	F	H	G	V	L	V	N	G	R	F	V	P	V	Y	A	S	I	K	D
Template Known Secondary structure								S										G	G	G	S								T	T									S	S										S		S					.	.	S	S	S	S	T	T	S	S			S	S	S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560			.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
							125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	D	R	L	E	Q	R	L	A	E	E	K	I	T	E	V	I	L	A	T	N	P	T	V	E	G	E	A	T	A	N	Y	I	A	E	L	C	A	Q	Y	D	V	E	A	S	R	I	A	H	G	V	P	V	G	G	E	L	E	M	V	D	G	T	T	L	S	H	S	L	A	G	R	H	K	I
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.											.	.																														.							.	.	.	.	.	.	.	.
Template Conservation																	.	.																														.							.	.	.	.	.	.	.	.
Template Sequence		N	S	R	S	R	I	E	A	L	R	K	L	A	H	D	.	.	A	E	F	V	I	V	G	T	D	P	D	T	E	G	E	K	I	A	W	D	L	K	N	L	L	S	G	C	G	.	A	V	K	R	A	E	.	.	.	.	.	.	.	.	F	H	E	V	T	R	R	A	I	L	E	A	L	E	S	L	R	D	V
Template Known Secondary structure																	.	.		S								S	S															T	T	S	S	.							.	.	.	.	.	.	.	.		S	B		S									T	S		B
Template Predicted Secondary structure																	.	.																														.							.	.	.	.	.	.	.	.
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.			.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.		.	.	.	.	.	.									.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
		200
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		677

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions