 |
Job Description | P0A7H6 | Confidence | 33.34% | Date | Thu Jan 5 11:05:41 GMT 2012 |
Rank | 169 | Aligned Residues | 45 |
% Identity | 16% | Template | c3iz6M_ |
PDB info |
PDB header:ribosome | Chain: M: PDB Molecule:40s ribosomal protein s18 (s13p); |
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
|
Resolution | 5.50 Å |
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | E | A | L | R | C | L | P | G | V | G | P | K | S | A | Q | R | M | A | F | T | L | L | Q | R | D | R | S | G | G | M | R | L | A | Q | A | L | T | R | A | M | S | E | I |
Query Conservation |   |
|
|   |   |
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
I | M | F | A | L | T | S | I | K | G | V | G | R | R | F | S | N | I | V | C | K | K | A | D | I | D | M | N | K | R | A | G | E | L | S | A | E | E | M | D | R | L | M | A | V |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| S | S | S | B | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|