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Job Description | P0A7H6 | Confidence | 38.46% | Date | Thu Jan 5 11:05:41 GMT 2012 |
Rank | 153 | Aligned Residues | 72 |
% Identity | 24% | Template | c3h7hA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt4; |
PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273)
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Resolution | 1.55 Å |
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52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | E | I | G | H | C | A | D | C | R | T | F | T | E | Q | E | V | . |
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P | R | R | Q | E | N | G | Q | I | C | V | V | E | S | P | A | D | I | Y | A | I | E | Q | T | G | Q | F | S | . |
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G | R | Y | F | V | L | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | H | L | R | A | C | L | L | C | S | L | V | K | T | I | D | Q | F | E | Y | D | G | C | D | N | C | D | A | Y | L | Q | M | K | G | N | R | E | M | V | Y | D | C | T | S | S | . |
S | F | D | G | I | I | A | M | M | S | P | E | D | S | W | V | S | K | W | Q | R | V | S | N | F | K | P | G | V | Y | A | V | . |
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Template Known Secondary structure |   |
T | T |  |  |  |  | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | H | L | S | P | L | D | G | I | G | P | D | D | I | G | L | D | R | L | E | Q | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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S | V | T | G | R | L | P | Q | G | I | V | . |
R | E | L | K | S | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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88 | . | 90 | . | . | . | . | . | . | . | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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