Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7H6
Confidence38.46%DateThu Jan 5 11:05:41 GMT 2012
Rank153Aligned Residues72
% Identity24%Templatec3h7hA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription elongation factor spt4; PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273)
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SEIGHCADCRTFTEQEV. . . . . CNICSN. . . . . . . . . . . . . . PRRQENGQICVVESPADIYAIEQTGQFS. . . GRYFVLM
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Template Sequence  RHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSS. SFDGIIAMMSPEDSWVSKWQRVSNFKPGVYAV. .
Template Known Secondary structure  TTTTT
B

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   11........20.........30.........40.........50..... ....60.........70.........80.......
 
   110.........120.........130.
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Query Sequence  GHLSPLDGIGPDDIGLDRLEQR
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Template Sequence  . . . . SVTGRLPQGIV. RELKSR
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   88.90........ .100....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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