 |
Job Description | P0A7H6 | Confidence | 74.31% | Date | Thu Jan 5 11:05:41 GMT 2012 |
Rank | 84 | Aligned Residues | 74 |
% Identity | 14% | Template | c3cngC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:nudix hydrolase; |
PDBTitle: crystal structure of nudix hydrolase from nitrosomonas europaea
|
Resolution | 2.00 Å |
|
 |
  |   |
54 | . | . | . | . | . | 60 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 70 | . | |
|
. | . | . | . | . | . | . | . | 80 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | H | C | A | D | C | R | T | . |
. |
. |
. |
. |
F | T | E | Q | E | V | C | N | I | . |
. |
C | S | N | P | R | R | Q | E | N | . |
. |
. |
. |
. |
. |
G | Q | I | C | V | V | E | S | P | A | D | I | Y | A | I | E | Q | T | G | . |
Q | F | S | G | R | Y | F | V | L | M | G | H | L | S | P | L | D | G | I | G |
Query Conservation |   |
|   |   |
|   |   |
|   |   | . | . | . | . | . |
|
|
|   |   |   |
|   |
| . | . |
|   |
|   |   |
|   |
|   | . | . | . | . | . | . |   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   | . |   |
|   |
|   |
|
|
|
|   |
|   |
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   | . |   |   |   |   |
|
|   |
|   |
|   |
|
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|
|   | . | . |
|
|
|
Template Sequence |   |
X | K | F | C | S | Q | C | G | G | E | V | I | L | R | I | P | E | G | D | T | L | P | R | Y | I | C | P | K | C | H | T | . |
I | H | Y | Q | N | P | K | V | I | V | G | C | I | P | E | W | E | N | K | V | L | L | C | K | R | A | I | A | P | Y | R | G | K | W | T | L | P | A | G | F | X | E | N | . |
. |
N | E | T |
Template Known Secondary structure |   |
|
| B |
| T | T | T |
|
| B |
|  |  |  |
|
| T | T |
| S | S |
|  |  |  |  | T | T | T | T |  | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S | S | S | S | T | T |
|  |  |
| S |  |  |  |
|
| T | . | . | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
| . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
| . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . |
  |
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | D | I | G | L | D | R | L | E | Q |
Query Conservation |   |
|
|   |
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
|
|   |
|
Template Sequence |   |
L | V | Q | G | A | A | R | E | T | L | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|