Job Description P0A7H6 Confidence 94.86% Date Thu Jan 5 11:05:41 GMT 2012 Rank 8 Aligned Residues 88 % Identity 20% Template c2o59B_ PDB info PDB header:isomerase/dna Chain: B: PDB Molecule:dna topoisomerase 3; PDBTitle: structure of e. coli topoisomerase iii in complex with an 8-2 base single stranded oligonucleotide. frozen in glycerol3 ph 8.0 Resolution 2.50 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.											.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																			.							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	C	V	V	E	S	P	A	D	I	Y	A	I	E	Q	T	.	G	Q	F	S	G	R	.	.	.	.	.	.	.	.	.	.	Y	F	V	L	M	G	H	L	S	P	L	D	G	I	G	P	D	D	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	F	I	A	E	K	P	S	L	A	R	A	I	A	D	V	L	P	K	P	H	R	K	G	D	G	F	I	E	C	G	N	G	Q	V	V	T	W	C	I	G	H	L	L	E	Q	A	Q	P	D	A	Y	D	S	R	Y	A	R	W	N	L	A	D	L	P	I	V	P	E	K	W	Q	L	Q	P	R	P	S	V
Template Known Secondary structure							S	S									T	T	S		S						S	S					T	T	T								S		S						G	G	G	T		G	G	G	G	S			S	T	T		S				S	S							S	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
					125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.																																								.	.	.
Query SS confidence		.	.	.																																								.	.	.
Query Sequence		.	.	.	L	D	R	L	E	Q	R	L	A	E	E	K	I	T	E	V	I	L	A	T	N	P	T	V	E	G	E	A	T	A	N	Y	I	A	E	L	C	A	Q	.	.	.	Y	D	V	E	A	S	R	I
Query Conservation		.	.	.																																								.	.	.
Alig confidence		.	.	.											.	.																												.	.	.
Template Conservation															.	.
Template Sequence		T	K	Q	L	N	V	I	K	R	F	L	H	E	.	.	A	S	E	I	V	H	A	G	D	P	D	R	E	G	Q	L	L	V	D	E	V	L	D	Y	L	Q	L	A	P	E	K	R	Q	Q	V	Q	R	C
Template Known Secondary structure															.	.		S								S	S														T	T							T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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