|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | T | S | P | L | L | T | Q | L | M | E | A | L | R | C | L | P | G | V | G | P | K | S | A | Q | R | M | A | F | T | L | L | Q | R | D | R | S | G | G | M | R | L | A | Q | A | L | T | R | A | M | S | E | I | G | H | C | A | D | C | R | T | F | T | E | Q | E | V | C | N | I | C | S | N | P | R | R | Q | E | N | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |
|   |
|
|   |
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |
|   |
|
|   |
|   |   |
| . |
|   |   |
Template Sequence |   |
K | Y | P | P | S | L | V | S | L | I | R | E | L | S | R | L | P | G | I | G | P | K | S | A | Q | R | L | A | F | H | L | F | E | Q | P | R | E | D | I | E | R | L | A | S | A | L | L | E | A | K | R | D | L | H | V | C | P | I | C | F | N | I | T | D | A | E | K | C | D | V | C | A | D | P | S | R | . |
D | Q | R |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
| T | T | T |
|
|  |  | S | S | S | S |
|  |  |  |  |
| T | T | S | . |
| T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . | 80 |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | C | V | V | E | S | P | A | D | I | Y | A | I | E | Q | T | G | Q | F | S | G | R | Y | F | V | L | M | G | H | L | S | P | L | D | G | I | G | P | D | D | I | G | L | D | R | L | E | Q | R | L | A | E | E | K | I | T | E | V | I | L | A | T | N | P | T | V | E | G | E | A | T | A | N | Y | I | A | E | L | C |
Query Conservation |   |
  |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |
|
|
|
|   |
|
|   |
|
|   |
|   |
|   |   |
|   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|
|
|
|
|   |
|
|   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |
|
|
|
|   |
|
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   | . | . |   |   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|
Template Sequence |   |
T | I | C | V | V | E | E | P | G | D | V | I | A | L | E | R | S | G | E | Y | R | G | L | Y | H | V | L | H | G | V | L | S | P | M | N | G | V | G | P | D | K | L | H | I | K | P | L | L | P | R | V | G | Q | . |
. |
G | M | E | V | I | L | A | T | G | T | T | V | E | G | D | A | T | A | L | Y | L | Q | R | L | L |
Template Known Secondary structure |   |
 |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | T |
|
|
| S |  |  |  |  |
| S | S |
|
| B | T | T | T | T | B |
| G | G | G | S |
|
| T | T | T | G | G | G |
|
| S | . | . | S |  |  |  |  |  |  |
|
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | Y | D | V | E | A | S | R | I | A | H | G | V | P | V | G | G | E | L | E | M | V | D | G | T | T | L | S | H | S | L | A | G | R | H | K | I | R |
Query Conservation |   |
|   |   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
Template Sequence |   |
E | P | L | G | A | A | I | S | R | I | A | Y | G | V | P | V | G | G | S | L | E | Y | T | D | E | V | T | L | G | R | A | L | T | G | R | Q | T | V | S |
Template Known Secondary structure |   |
T | T | T | T |  |  |  |  |  |
|
|
|
|
|
| T | T |
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
  |