 |
Job Description | P0AAT4 | Confidence | 38.84% | Date | Thu Jan 5 11:13:46 GMT 2012 |
Rank | 32 | Aligned Residues | 25 |
% Identity | 28% | Template | d2cqaa1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| TIP49 domain
|
Resolution | UNK |
|
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | N | D | M | L | K | L | G | D | W | L | E | M | P | K | Y | G | A | D | G | A | V | I | D | I | G |
Query Conservation |   |
  |   |
|
|
|
|   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|
|
|
|   |
|
|   |   | . | . |
|
|   |
|   |
|
|
|
Template Sequence |   |
L | T | K | D | K | V | Q | A | G | D | V | I | T | I | D | K | A | . |
. |
T | G | K | I | S | K | L | G |
Template Known Secondary structure |   |
 |  |  | T | T |
|
| T | T | S |  |  |  |  |  | T | T | . | . | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|