Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAT4
Confidence23.26%DateThu Jan 5 11:13:46 GMT 2012
Rank60Aligned Residues65
% Identity15%Templatec3owvA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dna-entry nuclease; PDBTitle: structural insights into catalytic and substrate binding mechanisms of2 the strategic enda nuclease from streptococcus pneumoniae
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   302.......310.........320...... ...330.........340.........350... . .....360
Predicted Secondary structure 


















.........










.
...........





Query SS confidence 
























. . . . . . . . .


























.
. . . . . . . . . . .





Query Sequence  INEWNRQQGSTESVLNLRRMTNIGT. . . . . . . . . FRAYLNEYLRNHPRIRKDMTLMVRQLA. P. . . . . . . . . . . GDNGLP
Query Conservation                        
  ......... 
  
   
  

 
       
    . ...........  


 
Alig confidence 
























.........


























.
...........





Template Conservation         
 
 


 



  
        

  

  
   
     
 
 




 


 





   
 
 
  
 
Template Sequence  LDGFDASTSNPKNIAVQTAWANQAQAEYSTGQNYYESKVRKALDQNKRVRYRVTLYYASNEDLVPSASQIEAKSSDGELE
Template Known Secondary structure  STT


STT
TTT
TT
TT


SSTT
SS
STTSS
Template Predicted Secondary structure 










































Template SS confidence 















































































   170.........180.........190.........200.........210.........220.........230.........240.........
 
   361.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  LEIYAF
Query Conservation 
 

 
Alig confidence 





Template Conservation 


 
 
Template Sequence  FNVLVP
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions